Table 1 Seven motifs of SSR loci in 16 species.
Species | Monomer | Dimer | Trimer | Tetramer | Pentamer | Hexamer | Heptamer | All | Size (Mb) | Density |
|---|---|---|---|---|---|---|---|---|---|---|
P. persica | 27,034 | 40,294 | 23,975 | 31,782 | 12,441 | 178,105 | 58,671 | 372,302 | 219 | 1,700 |
S. babylonica | 31,055 | 57,451 | 51,276 | 50,049 | 20,208 | 254,705 | 86,345 | 551,089 | 295 | 1,868 |
J. curcas | 83,074 | 33,951 | 32,392 | 42,609 | 12,737 | 227,431 | 78,032 | 510,226 | 308 | 1,657 |
M. notabilis | 111,688 | 72,963 | 42,208 | 48,430 | 24,611 | 279,875 | 128,953 | 708,728 | 312 | 2,272 |
T. cacao | 32,673 | 35,792 | 30,515 | 38,622 | 14,538 | 250,827 | 80,076 | 483,043 | 334 | 1,446 |
P. trichocarpa | 59,920 | 54,354 | 57,563 | 60,302 | 26,344 | 336,295 | 124,341 | 719,119 | 403 | 1,784 |
P. euphratica | 63,381 | 65,147 | 118,408 | 82,122 | 29,200 | 432,937 | 153,442 | 944,637 | 480 | 1,968 |
P. dactylifera | 35,953 | 61,436 | 49,823 | 55,589 | 21,096 | 324,903 | 103,674 | 652,474 | 547 | 1,193 |
A. trichopo | 100,331 | 159,465 | 65,405 | 69,895 | 26,679 | 469,772 | 185,400 | 1,076,947 | 682 | 1,579 |
F. excelsior | 109979 | 52,036 | 54,512 | 84,842 | 37,870 | 499,268 | 169,920 | 1,008,427 | 846 | 1,192 |
H. brasiliensis | 78,165 | 103,931 | 107,094 | 154,575 | 69,316 | 827,752 | 280,723 | 1,621,556 | 1,362 | 1,191 |
E. guineensis | 78, 323 | 105,403 | 85,834 | 108,984 | 43,820 | 747,818 | 265,081 | 1,435,263 | 1,485 | 967 |
G. biloba | 356,257 | 893,397 | 319,060 | 747,079 | 99,851 | 3,423,774 | 1,065,480 | 6,904,898 | 10,220 | 676 |
P. abies | 333,417 | 227,946 | 306,955 | 341,052 | 100,714 | 2,501,615 | 805,669 | 4,617,368 | 11,980 | 385 |
P. taeda | 570,852 | 840,323 | 1,399,969 | 1,507,006 | 401,640 | 10,793,943 | 3,524,504 | 19,038,237 | 21,709 | 877 |
P. lambertiana | 862,648 | 1,435,961 | 1,701,344 | 1,895,896 | 625,256 | 15,553,791 | 4,618,933 | 26,693,829 | 27,238 | 980 |
Total | 2,856,427 | 4,239,850 | 4,446,333 | 5,318,834 | 1,566,321 | 37,102,811 | 11,729,244 | 67,259,820 | 78,420 | |
Percentage | 4.25% | 6.30% | 6.61% | 7.91% | 2.33% | 55.16% | 17.44% | 100.00% |