Table 3 Hydrogen bond partner and binding probability of Gln1 in NiSOD H1Q and His1 in wt. NiSOD derived from molecular dynamics simulations. Superscript letters indicate the respective NiSOD subunit.
From: New insights into the mechanism of nickel superoxide degradation from studies of model peptides
Oε1 Gln1 A | Nε2 Gln1 A | Nε2 His1 D | ||||||
|---|---|---|---|---|---|---|---|---|
H-bond partner | Nε2 Gln13A | NH2 Arg47D | Oε1 Glu17D | Oγ Ser20D | O Val8A | Oε2 Glu17A | Oγ Ser20A | O Ile16A |
H-bond probability | 0.912 | 0.087 | 0.053 | 0.207 | 0.303 | 0.824 | 0.019 | 0.001 |