Table 3 Summary of differentially expressed known miRNAs in testis from cattleyak (CY) versus yak (YK).
From: Differentially expressed microRNAs between cattleyak and yak testis
MiRNA name | CY_Tpm | YK_Tpm | Fold-change log2 (CY/YK) | p-value | FDR | Up/Down regulated | Number of genomic targets |
|---|---|---|---|---|---|---|---|
bta-miR-1247-5p | 38.50574 | 9.358916 | 4.114338 | 2.10E-05 | 0.000101763 | UP | 2144 |
bta-miR-19b | 1443.226 | 653.6905 | 2.207813 | 3.80E-71 | 7.16E-70 | UP | 86 |
bta-miR-2332 | 390.6089 | 150.3797 | 2.597485 | 1.47E-26 | 1.70E-25 | UP | 90 |
bta-miR-2411-3p | 415.0229 | 158.272 | 2.622213 | 1.49E-28 | 1.81E-27 | UP | 858 |
bta-miR-2484 | 436.1548 | 131.3981 | 3.319338 | 2.15E-40 | 2.96E-39 | UP | 123 |
bta-miR-2904 | 443.8361 | 195.653 | 2.268486 | 3.96E-24 | 4.38E-23 | UP | 2963 |
bta-miR-369-3p | 61.74624 | 25.47694 | 2.423613 | 0.000100687 | 0.00046171 | UP | 3 |
bta-miR-455-3p | 64.47041 | 29.88945 | 2.156962 | 0.000283982 | 0.001267956 | UP | 1440 |
bta-miR-503-3p | 150.1078 | 73.72338 | 2.036095 | 1.50E-07 | 9.09E-07 | UP | 195 |
bta-miR-574 | 151.2986 | 58.5845 | 2.582571 | 4.62E-11 | 3.41E-10 | UP | 1096 |
bta-miR-592 | 40.52381 | 3.391165 | 11.94982 | 4.01E-09 | 2.76E-08 | UP | 32 |
bta-miR-105a | 2.976893 | 15.04598 | 0.197853 | 0.004449884 | 0.017558069 | DOWN | 443 |
bta-miR-10a | 3470.423 | 7410.491 | 0.468312 | 1.02E-306 | 5.76E-305 | DOWN | 520 |
bta-miR-126-3p | 1074.771 | 2427.455 | 0.442756 | 6.12E-114 | 1.56E-112 | DOWN | 35 |
bta-miR-126-5p | 3907.057 | 7828.106 | 0.499106 | 6.83E-280 | 2.90E-278 | DOWN | 3 |
bta-miR-128 | 107.0503 | 262.7056 | 0.407491 | 1.26E-15 | 1.19E-14 | DOWN | 1349 |
bta-miR-130b | 34.10613 | 80.56888 | 0.423316 | 2.51E-05 | 0.000119293 | DOWN | 274 |
bta-miR-133a | 29.28078 | 116.9537 | 0.250362 | 4.82E-13 | 4.15E-12 | DOWN | 795 |
bta-miR-135a | 54.15177 | 171.6531 | 0.315472 | 6.16E-15 | 5.60E-14 | DOWN | 303 |
bta-miR-139 | 24.77737 | 59.1521 | 0.418875 | 0.000194892 | 0.000877875 | DOWN | 418 |
bta-miR-143 | 34501.89 | 72492.95 | 0.475934 | 0 | 0 | DOWN | 697 |
bta-miR-146a | 384.0079 | 1180.822 | 0.325204 | 2.41E-91 | 5.11E-90 | DOWN | 571 |
bta-miR-146b | 9652.898 | 40429.24 | 0.23876 | 0 | 0 | DOWN | 727 |
bta-miR-147 | 1.883053 | 24.12422 | 0.078057 | 5.75E-06 | 2.93E-05 | DOWN | 647 |
bta-miR-15b | 70.6145 | 282.1996 | 0.250229 | 1.82E-30 | 2.38E-29 | DOWN | 1677 |
bta-miR-16a | 710.3616 | 1479.466 | 0.480147 | 3.90E-59 | 6.85E-58 | DOWN | 1534 |
bta-miR-16b | 1600.679 | 4393.994 | 0.364288 | 7.94E-287 | 4.04E-285 | DOWN | 1138 |
bta-miR-184 | 0.508842 | 12.3765 | 0.041114 | 0.001839606 | 0.007675078 | DOWN | 811 |
bta-miR-18a | 17.02364 | 67.22797 | 0.253223 | 5.76E-08 | 3.57E-07 | DOWN | 338 |
bta-miR-196a | 6.022989 | 34.96246 | 0.17227 | 1.55E-05 | 7.66E-05 | DOWN | 607 |
bta-miR-2318 | 2.654966 | 25.76386 | 0.10305 | 1.55E-05 | 7.59E-05 | DOWN | 29 |
bta-miR-2419-5p | 38.44689 | 76.92026 | 0.499828 | 0.000561739 | 0.002423095 | DOWN | 93 |
bta-miR-2435 | 2.994194 | 14.59649 | 0.205131 | 0.007573783 | 0.028769072 | DOWN | 76 |
bta-miR-2483-5p | 6.7603 | 20.11475 | 0.336087 | 0.012625225 | 0.046906859 | DOWN | 194 |
bta-miR-296-3p | 64.49805 | 136.2474 | 0.473389 | 6.70E-07 | 3.83E-06 | DOWN | 1881 |
bta-miR-34a | 11.52679 | 53.05775 | 0.21725 | 1.80E-07 | 1.08E-06 | DOWN | 2710 |
bta-miR-34b | 8.837222 | 948.8895 | 0.009313 | 1.68E-264 | 6.12E-263 | DOWN | 917 |
bta-miR-34c | 108.1892 | 17155.33 | 0.006306 | 0 | 0 | DOWN | 1465 |
bta-miR-375 | 8.70221 | 354.1817 | 0.02457 | 1.48E-91 | 3.28E-90 | DOWN | 351 |
bta-miR-378 | 130.7823 | 265.7867 | 0.492057 | 3.23E-11 | 2.45E-10 | DOWN | 1821 |
bta-miR-449a | 6.649543 | 5039.895 | 0.001319 | 0 | 0 | DOWN | 2360 |
bta-miR-449b | 0.339228 | 43.3717 | 0.007821 | 2.78E-12 | 2.32E-11 | DOWN | 2342 |
bta-miR-449c | 1 | 41.84592 | 0.023897 | 1.06E-11 | 8.55E-11 | DOWN | 1925 |
bta-miR-451 | 93.67503 | 217.4898 | 0.43071 | 4.00E-12 | 3.28E-11 | DOWN | 18 |
bta-miR-484 | 54.0478 | 125.1392 | 0.431901 | 2.11E-07 | 1.25E-06 | DOWN | 3369 |
bta-miR-486 | 1142.422 | 3311.228 | 0.345015 | 3.26E-234 | 1.11E-232 | DOWN | 847 |
bta-miR-6123 | 3.087651 | 21.62779 | 0.142763 | 0.000539356 | 0.00234643 | DOWN | 697 |
bta-miR-6526 | 1168.153 | 12648.09 | 0.092358 | 0 | 0 | DOWN | 2092 |
bta-miR-767 | 10.86563 | 44.6083 | 0.243579 | 5.59E-06 | 2.88E-05 | DOWN | 1521 |
bta-miR-9-5p | 20.94206 | 116.7742 | 0.179338 | 3.17E-17 | 3.05E-16 | DOWN | 261 |
