Table 1 Summary of acheal species evaluated informing its optimal growth temperature (OGT), genomic G + C content (G + C), motif’s information content (IC) and motif’s relative entropy (RE).
From: Core promoter information content correlates with optimal growth temperature
Index | NC_code | Name | OGT (°C) | IC (bits) | RE (bits) | G + C (%) |
|---|---|---|---|---|---|---|
0 | NC_014297 | Halalkalicoccus jeotgali | 35.5 | 11.3 | 13.2 | 0.65 |
1 | NC_015666 | Halopiger xanaduensis | 37 | 11 | 13.6 | 0.66 |
2 | NC_019964 | Halovivax ruber | 37 | 10.8 | 13 | 0.64 |
3 | NC_020388 | Natronomonas moolapensis | 38.5 | 12.6 | 14 | 0.65 |
4 | NC_021592 | Ferroplasma acidarmanus | 38.5 | 11.4 | 11.7 | 0.36 |
5 | NC_013922 | Natrialba magadii | 39 | 13.9 | 15.9 | 0.61 |
6 | NC_014729 | Halogeometricum borinquense | 41 | 12.9 | 14.6 | 0.61 |
7 | NC_013202 | Halomicrobium mukohataei | 42.5 | 13.3 | 15.2 | 0.66 |
8 | NC_013967 | Haloferax volcanii | 45 | 13.3 | 16.8 | 0.67 |
9 | NC_019974 | Natronococcus occultus | 45 | 12.9 | 15.2 | 0.65 |
10 | NC_007426 | Natronomonas pharaonis | 45 | 10.7 | 11.9 | 0.63 |
11 | NC_019792 | Natronobacterium gregoryi | 47 | 11.7 | 13.9 | 0.62 |
12 | NC_017941 | Haloferax mediterranei | 49 | 13.8 | 15.6 | 0.61 |
13 | NC_002607 | Halobacterium salinarum | 49 | 13.6 | 16.5 | 0.68 |
14 | NC_006396 | Haloarcula marismortui | 49 | 11.7 | 13.4 | 0.62 |
15 | NC_013743 | Haloterrigena turkmenica | 51 | 12.4 | 15.2 | 0.66 |
16 | NC_019962 | Natrinema pellirubrum | 51 | 13.4 | 16 | 0.65 |
17 | NC_017461 | Fervidicoccus fontis | 67.5 | 16.9 | 13.9 | 0.37 |
18 | NC_021169 | Archaeoglobus sulfaticallidus | 75 | 12.6 | 12.1 | 0.43 |
19 | NC_000917 | Archaeoglobus fulgidus | 76 | 12.9 | 12.6 | 0.49 |
20 | NC_015320 | Archaeoglobus veneficus | 77.5 | 14 | 13.4 | 0.47 |
21 | NC_012883 | Thermococcus sibiricus | 78 | 19.5 | 17.5 | 0.4 |
22 | NC_015151 | Vulcanisaeta moutnovskia | 79 | 18.8 | 17.1 | 0.42 |
23 | NC_013849 | Ferroglobus placidus | 80 | 13.7 | 13.4 | 0.44 |
24 | NC_018001 | Desulfurococcus fermentans | 81 | 15 | 14.3 | 0.45 |
25 | NC_008698 | Thermofilum pendens | 81.2 | 14.8 | 16.7 | 0.58 |
26 | NC_013741 | Archaeoglobus profundus | 82 | 13.8 | 12.4 | 0.42 |
27 | NC_014374 | Acidilobus saccharovorans | 82.5 | 11.9 | 13.2 | 0.57 |
28 | NC_014804 | Thermococcus barophilus | 85 | 18.9 | 17.3 | 0.42 |
29 | NC_014961 | Desulfurococcus mucosus | 85 | 14.1 | 14.8 | 0.53 |
30 | NC_022521 | Aeropyrum camini | 85 | 13.1 | 13.6 | 0.57 |
31 | NC_014160 | Thermosphaera aggregans | 85 | 12.8 | 12.5 | 0.47 |
32 | NC_014537 | Vulcanisaeta distributa | 87.5 | 18.8 | 17.7 | 0.45 |
33 | NC_015315 | Thermoproteus uzoniensis | 90 | 16.5 | 19.1 | 0.6 |
34 | NC_016885 | Pyrobaculum oguniense | 92 | 17.5 | 19 | 0.55 |
35 | NC_014471 | Ignisphaera aggregans | 93.5 | 13.1 | 12.3 | 0.36 |
36 | NC_015680 | Pyrococcus yayanosii | 98 | 17.9 | 18.3 | 0.52 |
37 | NC_000868 | Pyrococcus abyssi | 100 | 17.8 | 16.7 | 0.45 |
38 | NC_003413 | Pyrococcus furiosus | 100 | 17.5 | 15.7 | 0.41 |