Table 2 Chloroplast genome gene content and functional classification in Byrsonima coccolobifolia Kunth and B. crassifolia (L.) Kunth.
Gene group | Gene name | |||
|---|---|---|---|---|
Ribosomal RNA genes | rrn4.5 | rrn5 | rrn16 | rrn23 |
Transfer RNA genes | trnA-TGC * | trnC-CGA | trnD-GTC | trnE-TTC |
trnF-GAA | trnfM-CAT | trnG-GCC* | trnG-TCC | |
trnH-GTG | trnI-CAT * | trnK-UUU* | trnL-CAA | |
trnL-TAA* | trnL-TAG | trnM-CAT | trnN-GTT | |
trnP-GGG | trnP-TGG | trnQ-TTG | trnR-ACG | |
trnR-TCT | trnS-GCT | trnS-GGA | trnS-TGA | |
trnT-GGT | trnT-TGT | trnV-GAC | trnV-TAC* | |
trnW-CCA | trnY-GTA | |||
Small subunit of ribosome | rps2 | rps3 | rps4 | rps7 |
rps8 | rps11 | rps12 * | rps14 | |
rps15 | rps16* | rps18 | rps19 | |
rps12_3end | ||||
Large subunit of ribosome | rpl2 * | rpl14 | rpl16 | rpl20 |
rpl22 | rpl23 | rpl32* | rpl33 | |
rpl36 | ||||
RNA polymerase subunits | rpoA | rpoB | rpoC1* | rpoC2 |
NADH dehydrogenase | ndhA* | ndhB * | ndhC | ndhD |
ndhE | ndhF | ndhG | ndhH | |
ndhI | ndhJ | ndhK | ||
Photosystem I | psaA | psaB | psaC | psaI |
psaJ | ycf3* | |||
Photosystem II | psbA | psbB | psbC | psbD |
psbE | psbF | psbH | psbI | |
psbJ | psbK | psbL | psbM | |
psbN | psbT | psbZ | ||
Cytochrome b/f complex | petA | petB | petD | petG |
petL | petN | |||
ATP synthase | atpA | atpB | atpE | atpF* |
atpH | atpI | |||
Large subunit of rubisco | rbcL | |||
Maturase | matK | |||
Protease | clpP* | |||
Envelope membrane protein | cemA | |||
Subunit of acetyl-CoA-carboxylase | accD | |||
c-type cytochrome synthesis | ccsA | |||
Component of TIC complex | ycf1 | ycf1 Ψ | ||
Hypothetical chloroplast reading frames | ycf2 | |||
ORFs | orf42 | orf56 * | ycf 4 | ycf15 * |
ycf68 * | ||||
