Table 1 Summary of the top variants on chromosomes 11, 13, 17 and 19 determined by single-marker association analyses of sequence variants for fatty acids C4:0 to C14:0.

From: Unravelling genetic variation underlying de novo-synthesis of bovine milk fatty acids

FA

BTA

rs number

Top variant (bp)

Ref allele

Alt allele

MAF

p-value

C4:0

11

rs109837926

103,300,697

C

A

0.34

3.47e-9

C4:0

13

—

62,280,697

A

G

0.13

7.37e-7

C4:0

17

rs477658921

53,078,216

GAAAGTGA

G

0.08

8.09e-11

C4:0

19

rs797503644

52,884,766

G

A

0.28

2.17e-8

C6:0

13

rs41700742

64,648,620

A

G

0.45

6.82e-16

C6:0

17

rs379029510

51,669,903

T

C

0.46

2.05e-10

C6:0

19

rs476079746

37,421,626

G

GAAAAAA

0.40

5.86e-9

C8:0

13

rs381037433

64,523,817

G

GA

0.21

1.08e-18

C8:0

17

rs456738710

51,161,184

A

T

0.22

1.31e-8

C8:0

19

rs457952543

51,334,328

C

CT

0.03

1.26e-6

C10:0

13

rs381037433

64,523,817

G

GA

0.21

7.6e-16

C10:0

17

rs456738710

51,161,184

A

T

0.22

2.47e-8

C10:0

19

rs109016955

51,381,233

G

C

0.04

5.21e-9

C12:0

13

rs381037433

64,523,817

G

GA

0.21

4.79e-14

C12:0

17

rs456738710

51,161,184

A

T

0.22

2.17e-7

C12:0

19

rs109016955

51,381,233

G

C

0.04

7.5e-9

C14:0

13

rs381037433

64,523,817

G

GA

0.21

5.2e-14

C14:0

17

rs384370770

51,231,279

T

C

0.09

3.67e-8

C14:0

19

rs109016955

51,381,233

G

C

0.04

4.07e-11

  1. FA, fatty acid; BTA, bos taurus chromosome; rs, rs number; Top variant, position of the most significant markers in base pairs; Ref allele, reference allele; Alt allele, alternative allele; MAF, minor allele frequency.
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