Table 2 Genetic diversity parameters of SSRs based on their repeat motif.

From: Morphological and molecular dissection of wild rices from eastern India suggests distinct speciation between O. rufipogon and O. nivara populations

Repeat Motif

Na

Ne

PIC

Ho

He

I

Di-nucleotide

3.882

2.535

0.868

0.413

0.586

1.012

Tri-nucleotide

4.077

2.562

0.821

0.454

0.544

1.027

Tetra-nucloetide

3

2.173

0.914

0.463

0.536

0.843

Multi-Nucleotide

4.75

3.094

0.854

0.433

0.566

1.123

  1. Na: number of alleles; Ne: number of effective alleles; PIC: polymorphism information content; Ho: expected homozygosity; He: expected heterozygosity/Nei’s genetic diversity; I: Shannon’s information index.
Back to article page