Table 4 Several transcripts associated with SCD1-mediated vesicle transport and protein ubiquitination show upregulation in florets of apomictic plants.
Isotig number (apo + sex assembly) | Annotation | Apo readsa (454/Roche) | Sex readsa (454/Roche) | Differential expressiona (P-value) |
|---|---|---|---|---|
isotig28399 | Rab-GTPase-TBC domain (AT3G55020) | 85 | 55 | 0.00878 |
isotig27804 | AP-2 complex subunit alpha-2 (AT5G22770) | 185 | 119 | 0.00008 |
isotig28340 | AP-1 complex subunit gamma-2 (AT1G60070) | 82 | 45 | 0.00071 |
isotig19571 | Clathrin adaptor complex small chain (AT5G05010) | 14 | 0 | 0.00012 |
isotig13148 | Clathrin adaptor complex small chain (AT2G19790) | 62 | 37 | 0.00879 |
isotig30868 | Putative clathrin assembly protein (AT2G01600) | 125 | 80 | 0.00133 |
isotig29605 | Putative clathrin assembly protein (AT5G35200) | 104 | 64 | 0.00155 |
isotig28671 | Phospholipase D alpha 1 (AT3G15730) | 39 | 15 | 0.00151 |
isotig29172 | E3 ubiquitin-protein ligase COP1 (AT2G32950) | 61 | 34 | 0.00391 |
isotig29919 | zf-rbx1 (AT3G15070) | 164 | 85 | 2.80 E−7 |
