Figure 5
Virulence factors across clinical laboratory clusters. Metagenome sequencing data was used to search for open reading frames (ORFs) compared against the database VFDB25 to identify virulence factor genes with over 95% sequence identity. Listed are the factors identified in the dataset, grouped by taxonomic binning, with the VFDB accession number in parenthesis. The left panel shows enrichment in the abundance of ORFs across clusters. Here, the abundance is the depth of coverage of the genome where the ORFs were predicted. The right panel shows prevalence of samples that contain organisms carrying the corresponding virulence factor in each cluster.
