Table 2 Properties of differentially expressed proteins.

From: Proteomic approach to understand the molecular physiology of symbiotic interaction between Piriformospora indica and Brassica napus

UniProt accession

Protein name and species

Significance (−10lgP*)

Sequence Coverage (%)

Peptide

Unique Peptide

Fold change (ratio of T/C)**

Expression

M4ELI2

Uncharacterized protein (Brassica rapa)

35.08

17

2

2

0.27

Down

M4CH75

Uncharacterized protein (B. rapa)

33.24

37

14

2

13.39

Up

M4F6E3

Acid beta-fructofuranosidase 3, vacuolar-like (B. rapa)

28.38

28

13

8

0.34

Down

M4DWM1

Reticuline oxidase-like protein (B. rapa)

26.63

10

6

3

0.31

Down

A0A0H3XZN3

ATP synthase subunit alpha, chloroplastic OS (Brassica oleracea)

21.78

13

5

5

0.27

Down

M4D2P3

Niemann-Pick C1 protein (B. napus)

20.18

4

4

4

0.28

Down

A0A078CNZ6

Alpha-mannosidase OS (B. napus)

19.8

36

29

1

0.27

Down

C7E9R4

Peroxidase 12(Fragment) OS (B. rapa)

19.8

22

6

6

0.33

Down

A0A0D3DB06

Pro-resilin-like (B. oleracea)

18.85

9

4

1

2.66

Up

A0A078FEH1

Germin-like protein subfamily 2 member 4 (B. napus)

18.53

17

3

2

0.21

Down

M4DQZ2

LRR receptor-like protein kinase At1g51890 (B. rapa)

18.47

3

2

2

0.17

Down

G4TTT8

Related to cysteine synthase (P. indica)

18.15

5

1

1

0.29

Down

A0A078JPB7

Alpha-amylase/subtilisin inhibitor-like (B. napus)

18.02

20

3

3

0.47

Down

M4ECR7

Basic blue protein (B. napus)

17.73

39

3

3

0.16

Down

A0A078EYR1

Adenylosuccinatesynthetase (B. napus)

17.4

18

6

2

0.1

Down

A0A078I917

RNA-binding protein 8A-B-like (B. napus)

17.17

37

6

3

0.5

Down

A0A078J557

Epidermis-specific secreted glycoprotein EP1-like (B. napus)

17.13

26

12

1

0.34

Down

A0A0D3CXE3

MLP-like protein 34 (B. oleracea)

17.03

61

11

3

0.45

Down

A0A0D3BFD4

Alcohol dehydrogenase (Fragment) OS (B. oleracea)

16.96

8

4

1

0.26

Down

A0A078GUN5

Translationally-controlled tumor protein homolog (B. napus)

16.87

39

7

1

3.16

Up

A0A0D3E4R7

3-oxoacyl-[acyl-carrier-protein] synthase III (FabB), chloroplastic-like (B. oleracea)

16.19

15

4

4

0.2

Down

M4CCU0

LysM domain-containing GPI-anchored protein 2-like (B. rapa)

16.04

12

3

2

0.38

Down

M4ECA0

Glycerophosphodiester phosphodiesterase GDPDL3 (B. rapa)

15.83

11

6

2

0.46

Down

C7E9R5

Peroxidase 21 isofrom X2 (Fragment) (B. napus)

15.76

18

3

3

0.31

Down

A0A078GF82

Peptidylprolyl isomerase (B. napus)

15.74

8

1

1

4.63

Up

M4E2D2

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like (B. rapa)

15.73

13

1

1

7.35

Up

M4EHS7

Receptor-like kinase TMK4 (B. rapa)

15.54

7

4

2

0.21

Down

A0A078CRI1

Nudix hydrolase 3-like (B. napus)

15.42

7

4

4

0.2

Down

A0A078ILF0

N-acetyl-gamma-glutamyl-phosphate reductase (B. napus)

15.16

23

7

7

0.18

Down

M4CPB4

3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ-like (B. rapa)

15.05

27

6

5

0.48

Down

A0A078JH45

Eukaryotic translation initiation factor 3 subunit F OS (B. napus)

15.03

25

6

2

0.15

Down

A0A0D3B5Y5

Eukaryotic translation initiation factor 3 subunit F (B. oleracea)

14.98

32

7

3

0.41

Down

A0A078HY34

Suppressor protein STM1-like (B. napus)

14.92

16

3

3

0.37

Down

M4D445

Glucan endo-1,3-beta-glucosidase (B. rapa)

14.9

2

1

1

0.38

Down

A0A078EIS2

Uncharacterized protein OS (B. napus)

14.55

3

1

1

2.28

Up

A0A078FZ46

Subtilisin-like protease SBT2.5 (B. napus)

14.27

2

1

1

6.46

Up

M4E064

Jacalin-related lectin 35 (B. rapa)

14.26

34

8

6

0.49

Down

A0A078F4G5

Pectin acetylesterase 5-like (B. napus)

14.15

7

2

2

0.37

Down

M4E663

Peroxidase 69 (B. rapa)

14.1

25

8

4

5.34

Up

A0A078IBN1

RNA-binding protein CP29B, chloroplastic-like (B. napus)

13.92

21

5

1

6.26

Up

A0A0D3CS77

26 S protease regulatory subunit 7 homolog A-like (B. oleracea)

13.83

1

1

1

5.13

Up

A0A0D3CNP2

Aminoacylase-1 (B. oleracea)

13.83

15

6

2

0.15

Down

A0A078FBQ2

Protein modifier of SNC1 11-like (B. napus)

13.65

14

2

2

3.13

Up

M4CEX3

DNA ligase (B. rapa)

13.54

1

1

1

2.35

Up

A0A078E9C4

Monocopper oxidase-like protein SKU5 (B. napus)

13.38

21

10

1

0.35

Down

M4DJX7

Aspartic proteinase A1-like = GN (B. oleracea)

13.13

34

14

1

0.36

Down

  1. *Low scoring peptide identifications are filtered out by setting −10lgP threshold >13 (Peak studio 8.0). **Proteins which contains the T/C (Treated/Control) ratio ≥2.28 and ≤0.5 were considered as significant.
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