Table 1 Sample list of MiSeq analysis.

From: Accurate estimation of 5-methylcytosine in mammalian mitochondrial DNA

Index No.

Samples

Duration (min)

Abbreviation

1

Liver mtNA prep - 1

5

L1_05

2

Liver mtNA prep - 1

15

L1_15

3

Liver mtNA prep - 1

40

L1_40

4

Liver mtNA prep − 1

60

L1_60

5

Liver mtNA prep − 2

60

L2_60

6

Brain mtNA prep - 1

5

B1_05

7

Brain mtNA prep - 1

15

B1_15

8

Brain mtNA prep - 1

40

B1_40

9

Brain mtNA prep - 1

60

B1_60

10

Brain mtNA prep - 2

60

B2_60

11

Synthetic mtDNA

5

S1_05

12

Synthetic mtDNA

15

S1_15

13

Synthetic mtDNA

40

S1_40

14

Synthetic mtDNA

60

S1_60

15

ESCs mtNA prep - 1

5

E1_05

16

ESCs mtNA prep - 1

15

E1_15

18

ESCs mtNA prep - 1

40

E1_40

19

ESCs mtNA prep - 1

60

E1_60

20

ESCs mtNA prep - 2

5

E2_05

21

ESCs mtNA prep - 2

15

E2_15

22

ESCs mtNA prep - 2

40

E2_40

23

ESCs mtNA prep - 2

60

E2_60

25

ESCs mtNA prep - 3

60

E3_60

27

ESCs mtNA prep - 3

90

E3_90

  1. Samples analysed were three independent preparations of ESC mtNA, two independent preparations of liver mtNA, two independent preparations of brain mtNA and a preparation of synthetic mtDNA. Index numbers in 24 different PBAT-PE-iX-N4 (see Methods), duration of bisulfite conversion in minutes and abbreviated names are shown.