Table 2 The number of known and candidate cancer genes and enrichment analysis.

From: Pan-cancer analysis of somatic mutations and transcriptomes reveals common functional gene clusters shared by multiple cancer types

 

No. of genes

No. of known cancer genes

No. of candidate cancer genes

Cluster 1

342

0

30

Cluster 2

536

21

40

Cluster 3

69

1

5

Cluster 4

158

2

6

Cluster 5

151

7

16

Cluster 6

521

41**

59**

Cluster 7

399

33**

47**

Cluster 8

857

89**

92**

Cluster 9

38

1

6

Clusters

2,219

131*

194*

Not in clusters

4,597

201

296

Network

6,816

332*

490*

Not in network

50,472

176

544

Pan-cancer-wide selected genes

4,546

67*

278*

Not in pan-cancer-wide selected genes

52,742

441

756

  1. *Known and candidate cancer genes were enriched in clusters, networks, and PSGs compared to other genes.
  2. **Known and candidate cancer genes were enriched in these clusters compared to other clusters and other genes in networks.
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