Table-2 Main features of the predicted Rho-independent transcription terminators.
Intergenic location | Genome position | Strand | Predicted Rho-independent transcription terminator site | Free energy (kcal/mol) |
|---|---|---|---|---|
39.1 | 4310..4341 | Minus | TTTAAATAAAAGGCCTTCGGGCCTTTAGCTTTATG | −10.60 |
soc | 15135..15168 | Minus | AATTCAAGGACTCCTTCGGGAGTCCTTTTTCATT | −16.30 |
uvsX-40 | 21337..21371 | * | * | * |
Unknown gene | 25445..25477 | Minus | TAAATCTAGGGACCTCCGGGTCCCTTTTTCACAC | −12.10 |
regA | 28228..28259 | * | * | * |
α-gt | 35109..35140 | Minus | ACAAAATAAAGGGCTTCGGCCCTTTAGCTTTATA | −10.60 |
α-gt.2 | 36378..36411 | Minus | TATGCGGATAGGAGCTTCGGCTCCTATATTGCTT | −14.20 |
55.3 | 38744..38775 | Minus | GTTTAGCTAAGGGCTTCGGCCCTTTTTGGATAAT | −10.60 |
nrdH | 39707..39739 | Minus | GATTAAGACGGGCCCTCTGGGCCTTTCTTTCTCG | −8.80 |
Pin | 43124..43166 | Minus | AAATACCCTTATCTATTTAAGGTAAGGGTTTATTA | −10.70 |
nrdC.11 | 51781..51818 | Minus | AATGATAGGGAGCCTTCGGGCTCCCTTTTTTATT | −18.40 |
rI.−1 | 55358..55389 | Minus | TAACATTAGTCTCCTTCGGGAGACTTTTTTCATT | −13.50 |
Vs | 58098..58128 | Minus | TATATCAAGGGCGATATTGTCGCCCTTTTTCTTTA | −11.40 |
e.6 | 66465..66498 | Minus | ATAATGATAAGGGGCTTCGGCCCCTATTACTTGG | −13.90 |
RNA C | 69462..69503 | Minus | GCTTAGCCCCAGCCGAAAGGTTGGGGCTTTTTA | −17.40 |
8 | 84691..84728 | Plus | TAAATTAAGGGAGCCCATGGGCTCCCTTTTTCTT | −16.50 |
wac | 91126..91161 | * | * | * |
19 | 98662..98695 | Minus | AAGCAGGATGGGGATTTCTCCCCATTCaTTTTAT | −14.50 |
23 | 151432..151461 | Plus | AATTGAGGGAGCCTTCGGGTTCCCTTTTTCTTTA | −16.70 |
24(a) | 105412..105447 | Plus | AAAACAAAGGGACCTTTCGGTCCCTTTTTATTTA | −12.30 |
24(b) | 105467..105499 | * | * | * |
hoc | 106999..107032 | Minus | TAATCATAAGGGGCTTCGGCCCCTTTCTTCATTT | −14.50 |
54 | 118931..118972 | Plus | CTAACAATGGGGACCGAAAGGTCCCCATATTTTT | −19.90 |
alt.1 | 123501..123532 | Minus | GATTACTAAAGGCCTTCGGGCCTTTAaTTTTATAA | −14.80 |
30.9(a) | 128117..128154 | Minus | AAGTTGAGGACTCCTTCGGGAGTCCTTTTTTATT | −16.30 |
30.9(b) | 128162..128198 | * | * | * |
nrdB | 135904..135939 | Minus | TTAAGGAGTGGGCCGCAAGGCCCATTTTATTATG | −15.30 |
32 | 143116..143152 | Minus | ATTAATTGGGGACCTCTAGGGTCCCCTTTTTTAT | −14.90 |
T | 157574..157618 | Plus | CAAACCCTCGTTGAATTCGTCGATGAGGGTTTTC | −11.10 |
motA.1 | 160357..160396 | Minus | ATTTTAGGGAGAGCTTCGGCTCTCCCTTTTTTAT | −19.60 |
Ac | 161968..162004 | Minus | TGCCCTTGCTACTTTATTGGTAGCAcTATATTATG | −8.60 |
denB.1 | 164573..164601 | Minus | CAAATAAATAAGGGCTTCGGCCCTTTTGTTTTAA | −10.60 |
5.4 | 78461..78499 | Minus | GTCACTCCGCCATGTGTTTCATATGGCTTTTTAA | −10.20 |
Stp | 162165..162200 | Plus | TTCCTCACTGGCGTCCGAAGACGCCTTTAATTTT | −10.30 |
rIIB | 164798..164834 | Plus | TCCTTAGTTAAGGGCCGAAGCCCTTATTTAAATT | −10.00 |
