Figure 3
From: Evaluation of WISP1 as a candidate gene for bone mineral density in the Old Order Amish
Linkage disequilibrium(D’ top, r2 bottom) structure for all associated SNPs. For both (D’ and r2, values range from 0 (no LD) to 100 (complete LD). The thick white line represents a strand of a chromosome. The black bars on the white line of the chromosome are SNPs that have been identified and sequenced. These SNP locations are labeled in this picture from 1 to 5. Each of these SNPs has a name with corresponding numeric code. Each SNP is represented by a labeled grey triangle below the thick white line. Value in each box indicates (D’ or r2 value between 2 SNPs (intersection). For (D’ figures, no value indicates complete LD (100).
