Table 1 Number of differentially expressed genes between ILC and IDC.

From: Invasive lobular and ductal breast carcinoma differ in immune response, protein translation efficiency and metabolism

Number of differentially expressed (DE) Genes: ILC vs IDC

TCGA

METABRIC

PAM50

FDR < 0.05

FDR < 0.001

PAM50

FDR < 0.05

FDR < 0.001

LumA

ILC: N = 159

IDC: N = 311

11611

7033

LumA

ILC: N = 65

IDC: N = 533

2469

0

LumB

ILC: N = 18

IDC: N = 202

1415

110

LumB

ILC: N = 29

IDC: N = 401

0

0

Normal

ILC: N = 13

IDC: N = 18

1604

53

Normal

ILC: N = 38

IDC: N = 120

621

0

  1. Number of differentially expressed genes with different cutoffs of p-value (0.05 and 0.001) in TCGA and METABRIC. Tumors within different breast cancer intrinsic molecular subtypes (PAM50) were analyzed separately.