Table 2 Bacterial strains used in the PCR specificity test for Bacillus velezensis.

From: Understanding the ontogeny and succession of Bacillus velezensis and B. subtilis subsp. subtilis by focusing on kimchi fermentation

No.

Bacterial strains (Subjective synonym)

Sourcea

Host

This studyb

1

Bacillus amyloliquefaciens (Bacillus velezensis)

LMG 12331

N.D.

+

2

Bacillus amyloliquefaciens

KACC 10116T

Takamine bacterial amylase concentrate

+

3

Bacillus amyloliquefaciens

KACC 17029

Soil

+

4

Bacillus amyloliquefaciens

KACC 17030

Soil

+

5

Bacillus amyloliquefaciens

KACC 17031

Soil

+

6

Bacillus amyloliquefaciens

KACC 17032

Soil

+

7

Bacillus amyloliquefaciens subsp. amyloliquefaciens

LMG 12325

N.D.

+

8

Bacillus amyloliquefaciens subsp. amyloliquefaciens

LMG 12326

N.D.

+

9

Bacillus amyloliquefaciens subsp. plantarum

LMG 26770T

N.D.

+

10

Bacillus amyloliquefaciens subsp. plantarum

LMG 12384

N.D.

+

11

Bacillus amyloliquefaciens subsp. plantarum

LMG 17599

N.D.

+

12

Bacillus siamensis

KACC 15859

Gochujang

+

13

Bacillus subtilis

KACC 10113

Soil

+

14

Bacillus subtilis

KACC 10114

Adenine and phenylalanine-requiring mutant

+

15

Bacillus subtilis

KACC 11994

Rhizosphere of Brassica napus

+

16

Bacillus methylotrophicus

LMG 27586T

N.D.

+

17

Bacillus subtilis subsp. subtilis

LMG 7135T

N.D.

18

Bacillus subtilis

KACC 10111

N.D.

19

Bacillus subtilis subsp. spizizenii

LMG 19156T

N.D.

20

Bacillus licheniformis

LMG 12363T

N.D.

21

Bacillus pumilus

LMG 18928T

N.D.

22

Bacillus sonorensis

LMG 21636T

N.D.

23

Bacillus vallismortis

LMG 18725T

N.D.

24

Bacillus atrophaeus

KACC 12090T

Soil

25

Bacillus alveayuensis

KACC 13323T

Deep sea sediment of the Ayu Trough (4000 m below sea level) in the western Pacific Ocean

26

Bacillus pocheonensis

KACC 14006T

Soil, ginseng field

27

Bacillus kribbensis

KACC 14005T

Soil

28

Bacillus circulans

KACC 14392T

Soil

29

Bacillus firmus

KACC 10897T

N.D.

30

Bacillus jeotgali

KACC 17399T

Jeotgal

31

Bacillus niabensis

KACC 11279T

N.D.

32

Bacillus litoralis

KACC 12148T

Sea water

  1. aSuperscript “T” indicates type strain.
  2. bConventional or real-time assay; + and − indicate species detected or not detected, respectively.
  3. cN.D., Not determine.