Table 11 Differentially expressed piRNAs in hepatocellular carcinoma vs healthy patient’s tissue samples (FDR < 0.05).

From: Non-coding RNAs in Various Stages of Liver Disease Leading to Hepatocellular Carcinoma: Differential Expression of miRNAs, piRNAs, lncRNAs, circRNAs, and sno/mt-RNAs

Feature ID

Chromosome

Fold change

FDR

piR-hsa-32299

1

4044.62

9.95E-10

piR-hsa-23670.1

8

2335.40

4.15E-14

piR-hsa-24684.5

5

2219.85

3.09E-08

piR-hsa-24684

1

2072.08

7.08E-10

piR-hsa-28488

6

1098.53

1.93E-15

piR-hsa-7239

2

949.32

2.37E-14

piR-hsa-24684.1

1

761.46

2.93E-08

piR-hsa-5939

12

529.51

2.33E-15

piR-hsa-24684.2

1

375.35

8.29E-08

piR-hsa-24684.3

11

355.01

1.96E-07

piR-hsa-24684.7

5

331.73

3.48E-06

piR-hsa-24684.8

6

241.61

7.96E-07

piR-hsa-24684.4

5

228.88

2.41E-07

piR-hsa-23655

5

106.32

2.38E-06

piR-hsa-24684.6

5

88.62

4.13E-05

piR-hsa-5067.1

3

46.48

1.07E-08

piR-hsa-5067.4

6

44.68

3.71E-06

piR-hsa-12488

11

39.49

1.55E-06

piR-hsa-12488.1

M

35.19

3.88E-06

piR-hsa-6147

2

30.46

1.03E-03

piR-hsa-26131

7

20.96

5.50E-04

piR-hsa-28378.6

6

19.88

4.16E-08

piR-hsa-28374.6

6

19.88

4.16E-08

piR-hsa-1338

11

19.63

4.37E-09

piR-hsa-28378.2

5

18.44

6.16E-08

piR-hsa-28374.2

5

18.44

6.16E-08

piR-hsa-28378

12

18.44

3.01E-08

piR-hsa-28374

12

18.44

3.01E-08

piR-hsa-28374.4

6

18.29

3.90E-08

piR-hsa-28378.4

6

18.29

3.90E-08

piR-hsa-28374.5

6

17.33

3.85E-08

piR-hsa-28378.5

6

17.33

3.85E-08

piR-hsa-28374.1

12

17.22

4.14E-08

piR-hsa-28378.1

12

17.22

4.14E-08

piR-hsa-23786

20

16.93

4.71E-12

piR-hsa-28374.3

6

16.31

4.23E-08

piR-hsa-28378.3

6

16.31

4.23E-08

piR-hsa-26754

5

14.19

8.68E-05

piR-hsa-3178

20

12.26

8.67E-07

piR-hsa-28487

2

9.95

3.28E-08

piR-hsa-15023.1

M

8.68

8.72E-04

piR-hsa-15023

8

8.24

8.71E-04

piR-hsa-28116.3

6

7.13

2.75E-02

piR-hsa-28116.1

17

7.05

3.12E-02

piR-hsa-28116.2

6

6.84

3.45E-02

piR-hsa-28116.7

6

6.73

3.72E-02

piR-hsa-28116.6

6

6.64

4.50E-02

piR-hsa-28116.4

6

6.48

2.58E-02

piR-hsa-28116.8

6

6.36

2.91E-02

piR-hsa-28116.9

6

6.15

3.63E-02

piR-hsa-28190

11

6.13

6.32E-05

piR-hsa-2155

M

5.29

4.29E-02

piR-hsa-27616

19

4.98

5.27E-07

piR-hsa-7193.2

1

4.61

7.08E-03

piR-hsa-7193.3

15

4.49

1.39E-02

piR-hsa-7193.6

2

4.44

1.48E-02

piR-hsa-7193.5

15

4.42

4.51E-03

piR-hsa-7193.1

1

4.33

7.65E-03

piR-hsa-7193.4

15

4.30

7.43E-03

piR-hsa-23619.1

16

4.23

1.70E-02

piR-hsa-25783.4

16

4.20

1.61E-02

piR-hsa-23619.4

6

4.16

1.18E-02

piR-hsa-7193

1

4.12

1.39E-02

piR-hsa-23619

1

4.09

2.36E-02

piR-hsa-25783.6

2

4.05

2.06E-02

piR-hsa-25783.8

6

4.05

1.58E-02

piR-hsa-23619.3

5

4.04

2.88E-02

piR-hsa-25783.1

16

4.03

1.86E-02

piR-hsa-28390

2

3.98

3.29E-03

piR-hsa-25783

1

3.98

2.15E-02

piR-hsa-14647

9

3.87

2.85E-04

piR-hsa-25783.2

16

3.86

2.52E-02

piR-hsa-23619.2

5

3.82

2.04E-02

piR-hsa-28875

2

3.80

2.40E-02

piR-hsa-28875.1

M

3.79

2.91E-02

piR-hsa-25783.3

16

3.75

2.06E-02

piR-hsa-25783.7

5

3.69

2.91E-02

piR-hsa-25783.5

17

3.64

2.86E-02

piR-hsa-28390.1

8

3.62

4.46E-03

piR-hsa-1823

2

3.38

9.34E-04

piR-hsa-1742

1

2.95

8.96E-05

piR-hsa-28319.1

9

1.85

1.01E-02

piR-hsa-28319

9

1.80

1.14E-02

piR-hsa-28382

12

−1.63

4.36E-02

piR-hsa-26686

M

−1.84

2.03E-02

piR-hsa-11362

21

−1.88

3.47E-02

piR-hsa-9010

17

−1.88

1.48E-02

piR-hsa-993

5

−1.90

9.08E-03

piR-hsa-20266

5

−2.29

2.15E-03

piR-hsa-26685

M

−2.35

2.99E-03

piR-hsa-20266.1

M

−2.38

9.82E-04

piR-hsa-1043

4

−2.40

9.82E-04

piR-hsa-24672.3

6

−2.41

6.97E-03

piR-hsa-24672

1

−2.43

5.81E-03

piR-hsa-24672.4

6

−2.44

7.14E-03

piR-hsa-24672.1

1

−2.45

6.07E-03

piR-hsa-23317

6

−2.65

9.61E-03

piR-hsa-28212.2

7

−2.69

6.82E-04

piR-hsa-28212.1

11

−2.70

6.10E-04

piR-hsa-25447

18

−2.82

9.80E-05

piR-hsa-28212

1

−2.82

2.94E-04

piR-hsa-27282

14

−2.99

1.91E-04

piR-hsa-25780.10

4

−3.11

2.88E-02

piR-hsa-26039

17

−3.30

4.84E-05

piR-hsa-17444

20

−3.46

7.18E-06

piR-hsa-11361

9

−3.66

3.52E-03

piR-hsa-26508.6

X

−3.66

2.50E-03

piR-hsa-2153

11

−4.00

2.00E-03

piR-hsa-20757.2

1

−4.30

3.05E-02

piR-hsa-26681

M

−4.36

1.77E-05

piR-hsa-26684

M

−4.36

1.77E-05

piR-hsa-2117

7

−5.03

7.76E-06

piR-hsa-11360

9

−5.05

1.59E-04

piR-hsa-1177

19

−5.27

2.17E-06

piR-hsa-27493

1

−5.27

7.05E-04

piR-hsa-3200

16

−7.10

7.96E-07

piR-hsa-20613

7

−7.45

9.32E-07

piR-hsa-28478

2

−10.34

4.94E-11

piR-hsa-963

17

−11.58

6.23E-08

piR-hsa-25780.1

1

−11.82

2.13E-04

piR-hsa-25780

1

−11.96

2.34E-04

piR-hsa-25780.9

3

−12.16

3.07E-04

piR-hsa-5936

5

−20.70

3.07E-10

piR-hsa-5937

3

−51.29

3.07E-10

piR-hsa-5938

3

−56.84

4.68E-09

piR-hsa-28525

4

−57.64

4.37E-06

piR-hsa-820

2

−78.24

9.30E-06

piR-hsa-952

22

−517.94

1.14E-19

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