Table 1 G4 prone sequences detected by G4hunter. Mutations as compared to the most frequently found motif (HCV110-131) are shown in bold/italic.
From: RNA synthesis is modulated by G-quadruplex formation in Hepatitis C virus negative RNA strand
Sequences | Occurrence in the alignment | G4H Score |
|---|---|---|
CGGGAGGGGGGGUCCUGGAGGC (HCV110-131) | 65 | 1.77 |
CGGGAGGGGGGGGCCUGGAGGC | 21 | 1.95 |
CGGGAGGGGGGAUCCUGGAGGC | 14 | 1.59 |
CGGGAGGGGGAGUCCUGGAGGC | 4 | 1.45 |
CGGAAGGGGGGGGCCUGGAGGC | 1 | 1.73 |
CGGGAGGGGGGGACCUGGAGGC | 1 | 1.77 |
