Table 1 Pipeline components in WeFold2 and WeFold3 and the groups that contributed.
Contribution | WeFold2 | WeFold3 | Group |
|---|---|---|---|
Alignment | HHPred | Söding | |
Sampling | Foldit | Baker&Khatib Groups | |
RosettaServer | Baker Group | ||
UNRES | UNRES | Scheraga&Gdansk Groups | |
Zhang | Zhang Group | ||
Contact Predictions | GREMLIN | GREMLIN | Baker Group |
Floudas | Floudas | Floudas Group | |
ICOS | Jaume Bacardit | ||
Secondary Structure Pred. | conSSert | conSSert | Floudas Group |
Clustering | Wallner | Björn Wallner | |
Minimum Variance | Minimum Variance | Scheraga&Gdansk Groups | |
Filtering | Wallner | ProQ2 | Björn Wallner |
Refinement | Delbem | Delbem Group | |
QA/Selection | KoBaMIN | Levitt Group | |
GalaxyRefine | GalaxyRefine | Seok Group | |
PTIGRESS | TIGRESS | Floudas Group | |
3D refine | 3D refine | Cheng Group | |
APOLLO | APOLLO | Cheng Group | |
Delbem | Delbem Group | ||
Kloczkowski/Pawlowski | Kloczkowski Group | ||
Kloczkowski/Seder | Kloczkowski/Seder | Kloczkowski Group | |
MESHI-score | MESHI-score | Keasar Group | |
MESHI-MSC | Mirzaei&Crivelli Group | ||
ModFOLD5 | ModFOLD6 | McGuffin Group | |
MUfold | Xu Group | ||
ProQ2 | ProQ2 | Björn Wallner | |
SVLab | SVLab | SVLab |
