Table 1 Oligomeric states, thermostability and enzyme activity of wild-type NylC and mutant enzymes.

From: Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase

Enzyme

Amino acid substitutions in NylCp2 sequence

Oligomeric state*1

Subunit identified by SDS-PAGE

CD-melting analysis*2 Tm (°C)

Enzyme activity*3 (U mg−1)

NylCp2

Trimer/Dimer

(Monomer)

α, β

52

7.1

NylC A

G111S D122G H130Y L137A V225M

Tetramer

α, β

60

15.7

NylC K

D36A A41V M50T I60V A62S G111S D122G H130Y L137A V225M T230G V231I V257L E263Q G354A

Tetramer

(Monomer, Higher oligomer)

α, β

67

14.9

NylCp2-Y130

H130Y

Not tested

α, β

63

0.85

A137

L137A

Dimer

(Monomer, Higher oligomer)

Precursor

41

 < 0.1

G122Y130

D122G H130Y

Not tested

α, β

81

7.1

G122A137

D122G L137A

Dimer or monomer (Trimer)

Mixture of α, β, precursor

Not tested

Not tested

G122Y130A36Q263

D122G H130Y D36A E263Q

Tetramer (Monomer)

α, β

88

6.8

  1. *1Oligomeric states of NylC in aqueous solution were estimated from analytical centrifugation. Minor populations are shown in parentheses. For example, in wild-type NylCp2, trimeric and dimeric αβ heterodimers were found at equal amounts, while a small population was present as monomeric αβ heterodimer. In NylCp2-A137, uncleaved dimeric molecules share the dominant population.
  2. *2The thermostability determined previously by CD melting analysis (ref.9) is shown.
  3. *3The enzyme activity was assayed at 30 °C under standard assay conditions (4 mg ml−1 of the cyclic Ahx oligomer) (ref.9).