Table 2 Associations of rs11177 and rs6617 with a KOA risk.

From: Common variants in the GNL3 contribute to the increasing risk of knee osteoarthritis in Han Chinese population

Group

H-WE P-value

Allele number (%)

Allelic P-value*

OR* 95% CI

Genotype number (%)

Genotypic P-value*

The discovery stage

rs11177

 

G

A

  

GG

GA

AA

Co-dominant model

0.000021

Case

0.712

1056(50.19)

1048(49.81)

0.000026

1.25

268(25.48)

520(49.43)

264(25.1)

Dominant model

0.001573

Control

0.670

2362(55.79)

1872(44.21)

 

1.13–1.39

654(30.89)

1054(49.79)

409(19.32)

Recessive model

0.000182

The replication stage

rs11177

 

G

A

  

GG

GA

AA

Co-dominant model

0.000014

 

0.663

1181(50.34)

1165(49.66)

0.000011

1.25

301(25.66)

579(49.36)

293(24.98)

Dominant model

0.000552

 

0.912

2640(55.88)

2084(44.12)

 

1.13–1.38

739(31.29)

1162(49.2)

461(19.52)

Recessive model

0.000193

rs6617

 

C

G

  

CC

CG

GG

Co-dominant model

0.000834

 

0.335

1177(50.17)

1169(49.83)

0.000222

1.21

287(24.47)

603(51.41)

283(24.13)

Dominant model

0.000552

 

0.934

2590(54.83)

2134(45.17)

 

1.09–1.33

709(30.02)

1172(49.62)

481(20.36)

Recessive model

0.010504

  1. CI: confidence interval; OR: odds ratio.
  2. Risk allele and significant P values are in bold italics. OR refers to the risk allele odds ratio in both groups.
  3. *Means P values with adjustments for covariants (gender, age and BMI).