Table 3 Differentially expressed lncRNAs in HNSCC samples.

From: Comprehensive analysis of competitive endogenous RNAs network associated with head and neck squamous cell carcinoma

Top 25 up-regulated lncRNAs

Top 25 down-regulated lncRNAs

lncRNA

logFC

P Value

FDR

lncRNA

logFC

P Value

FDR

HOXC-AS2

3.7846

1.49E-48

2.85E-46

SLC8A1-AS1

−5.1342

9.90E-182

7.58E-178

FOXD2-AS1

2.2903

4.61E-46

7.22E-44

LINC01829

−5.8205

1.44E-154

5.50E-151

AC114956.1

3.2942

1.66E-40

1.93E-38

IL12A-AS1

−4.1194

9.77E-138

2.50E-134

AC114956.2

3.2753

1.14E-38

1.17E-36

AC005165.1

−5.1730

1.19E-99

2.27E-96

LINC01633

4.0588

6.75E-36

5.39E-34

AC005532.1

−4.1191

3.54E-98

5.43E-95

AC134312.5

4.0872

9.91E-35

7.10E-33

AC027130.1

−4.6787

7.70E-97

9.83E-94

LINC02081

4.1130

1.28E-30

7.31E-29

FOXCUT

−3.8970

3.74E-89

4.10E-86

RNF144A-AS1

3.1358

1.75E-30

9.88E-29

HCG22

−5.0320

3.56E-88

3.41E-85

GSEC

2.0810

8.20E-29

4.39E-27

AL357093.2

−5.1573

9.00E-83

7.66E-80

HOXA10-AS

3.3317

2.29E-28

1.16E-26

AL356123.2

−4.5085

6.59E-80

5.05E-77

U62317.2

2.7338

7.97E-28

3.75E-26

AP000866.2

−2.4229

3.38E-74

2.36E-71

DNAH17-AS1

3.0039

4.50E-27

2.00E-25

ZNF710-AS1

−2.3392

1.75E-71

1.12E-68

LINC01614

5.7936

4.89E-27

2.17E-25

AL137246.2

−6.5634

5.67E-69

3.35E-66

LINC01929

5.1264

8.05E-27

3.51E-25

LINC02303

−6.2229

1.42E-68

7.80E-66

AL358334.2

3.0447

1.14E-26

4.96E-25

LINC00443

−4.7040

3.42E-68

1.75E-65

LINC00941

3.9753

1.26E-26

5.43E-25

AL161668.3

−3.7569

4.58E-68

2.19E-65

SLC12A5-AS1

3.3598

2.13E-26

8.91E-25

MIR133A1HG

−5.3815

1.03E-67

4.62E-65

AC008011.2

3.6566

2.08E-25

8.31E-24

AC005056.1

−3.2961

4.25E-66

1.81E-63

AC010595.1

6.4630

4.72E-25

1.81E-23

AL356123.1

−4.7422

1.47E-65

5.91E-63

HAGLROS

3.2617

5.59E-25

2.12E-23

AC002546.2

−4.8176

3.72E-65

1.42E-62

AC093520.1

3.3381

1.18E-24

4.34E-23

LINC01482

−3.0702

6.25E-64

2.28E-61

TM4SF19-AS1

2.7448

1.77E-24

6.34E-23

AC091563.1

−2.9440

1.60E-62

5.58E-60

DUXAP8

3.5420

2.20E-24

7.82E-23

LINC00314

−6.2686

2.28E-62

7.61E-60

AC078778.1

2.7801

2.54E-24

8.90E-23

AP003500.1

−3.8788

4.36E-62

1.39E-59

FIRRE

3.4348

5.06E-24

1.72E-22

FALEC

−3.4100

2.89E-61

8.86E-59

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