Table 5 The physical map of SNP markers after quality control in the genome.
CHROM | Map Distance (Kb)a | No. SNPs | Density (kb/SNP) | CHROM | Map Distance (Kb) | No.SNPs | Density (kb/SNP) |
|---|---|---|---|---|---|---|---|
1 | 195273.4 | 56347 | 3.5 | 16 | 496.6 | 234 | 2.1 |
2 | 148805.6 | 33828 | 4.4 | 17 | 10451.6 | 4729 | 2.2 |
3 | 110446.7 | 31950 | 3.5 | 18 | 11200.7 | 5298 | 2.1 |
4 | 90214.2 | 24890 | 3.6 | 19 | 9980.4 | 4705 | 2.1 |
5 | 59540.2 | 17108 | 3.5 | 20 | 14299.5 | 4632 | 3.1 |
6 | 34902.1 | 11103 | 3.1 | 21 | 6789.1 | 4602 | 1.5 |
7 | 36212.8 | 12169 | 3.0 | 22 | 4073.4 | 2141 | 1.9 |
8 | 28733.1 | 8945 | 3.2 | 23 | 5712.2 | 3289 | 1.7 |
9 | 23431.7 | 10784 | 2.2 | 24 | 6319.2 | 4262 | 1.5 |
10 | 19879.9 | 9183 | 2.2 | 25 | 2190.3 | 1391 | 1.6 |
11 | 19393.5 | 7310 | 2.7 | 26 | 5310.7 | 3287 | 1.6 |
12 | 19864.8 | 7352 | 2.7 | 27 | 5197.5 | 2761 | 1.9 |
13 | 17759.8 | 5848 | 3.0 | 28 | 4742.5 | 2664 | 1.8 |
14 | 15157.4 | 7792 | 1.9 | LGE22b | 743.5 | 35 | 21.2 |
15 | 12640.8 | 5981 | 2.1 | LGE64 | 962.6 | 85 | 11.3 |
Total | 920725.9 | 294705 |
