Table 3 Genomic information, and associated environmental variables, of candidate genes cross-detected by Samβada, LFMM, PCAdapt and |iHs| > 2.
From: Whole genome SNP-associated signatures of local adaptation in honeybees of the Iberian Peninsula
Gene | # SNPs | Genomic position | Environmental variables | Putative function |
|---|---|---|---|---|
GB49881 | 28 | Intronic | Long, prec1, cld4 | Undescribed |
GB49882 | 6 | Intronic | Cld4 | Sleep |
GB49899 | 4 | Intronic | Long, prec1 | Pdz (post-synaptic density) domain |
GB48696 | 4 | Non-syn, syn, intergenic (<1235 bp) | Prec5, prec8 | Inter-male aggressive behavior |
GB48694 | 3 | Intronic | Prec5 | Undescribed |
GB48105 | 2 | Intronic (8 bp), UTR | Long, prec1 | Neurogenesis |
GB49874 | 2 | Intergenic (<2060 bp) | Long, prec1 | Undescribed |
GB48702 | 2 | Intronic (61 bp), intergenic (1, 111 bp) | Lat, prec5, prec8 | Organism reproduction |
GB51286 | 2 | Intergenic (<17, 754 bp) | Long, prec1 | Undescribed |
GB48701 | 2 | Intergenic (<804 bp) | Lat, prec5, prec8 | Undescribed |
GB48697 | 2 | Syn, Intergenic (678 bp) | Lat, prec5, prec8 | Undescribed |
GB51427 | 1 | Intergenic (952 pb) | Long | Response to fungus |
GB49878 | 1 | Intergenic (495 bp) | Long, prec1 | Response to DDT |
GB47226 | 1 | Syn | Long, prec8 | Undescribed |
GB49879 | 1 | Intronic (204 bp) | Long, prec1 | Sleep |
GB47281 | 1 | Syn | Long, prec8 | Ovarian nurse cell to oocyte transport; |
GB47279 | 1 | Non-syn | Long, prec8 | Response to insecticide |
GB48706 | 1 | Intergenic (30 bp) | Prec5 | Axoneme assembly |
GB51401 | 1 | Intergenic (180 bp) | Long | ATP-dependent RNA helicase activity |
GB51396 | 1 | Non-syn | Long | Oxidoreductase activity, |
GB51422 | 1 | Syn | Long | Undescribed |
GB44109 | 1 | Intergenic (2182 bp) | Prec1 | Oxidation-reduction process |
