Table 3 The highest similarity of the nucleotide sequences of enteroviruses in all of the sequenced genomic regions of the K624/YN/CHN/2013 strain using BLAST online.
From: Molecular characterization of echovirus 12 strains isolated from healthy children in China
Genomic region | K624/YN/CHN/2013 | ||||
|---|---|---|---|---|---|
Type | Strain | %Nucleotide identity | Accession number | Disease | |
5′UTR | EV-79 | NH95–0601 | 93 | AB426610 | — |
VP4 | CV-B5 | China/GD237/2009 | 94 | HQ005460 | Hand, foot and mouth disease |
VP2 | CV-B5 | China/GD237/2009 | 94 | HQ005460 | Hand, foot and mouth disease |
VP3 | CV-A9 | EBMSV0003/THA/2010 | 74 | KU574638 | Respiratory infections |
VP1 | E-12 | 281-YN-CHN-2016HC | 92 | LC167435 | Healthy child |
2A | CV-B4 | CB4 Cph1 | 81 | KC558559 | — |
2B | E-30 | KM/A363/09 | 85 | KF878942 | — |
2C | E-6 | SD11CHN | 89 | JX976771 | Hand, foot and mouth disease |
3A | CV-B4 | GX/10 | 95 | JX308222 | Hand, foot and mouth disease |
3B | CV-B5 | PMKA1315/THA/2011 | 100 | KU574625 | Respiratory infections |
3C | CV-B4 | GX/10 | 96 | JX308222 | Hand, foot and mouth disease |
3D | E-6 | SD11CHN | 94 | JX976771 | Hand, foot and mouth disease |
3′UTR | CV-B5 | 19CSF | 97 | JX017381 | Viral encephalitis |
P1 | E-12 | 281-YN-CHN-2016HC | 92 | LC167435 | From healthy children |
P2 | E-6 | SD11CHN | 85 | JX976771 | Hand, foot and mouth disease |
P3 | E-6 | SD11CHN | 94 | JX976771 | Hand, foot and mouth disease |
