Table 1 Repeats (≥60 bp) in the kenaf mt genome.

From: Complete sequence of kenaf (Hibiscus cannabinus) mitochondrial genome and comparative analysis with the mitochondrial genomes of other plants

No.	Size (bp)	Identity (%)	Copy-1		Copy-2^a		Copy-3^a		Type^b
No.	Size (bp)	Identity (%)	Start	End	Start	End	Start	End	Type^b
R1	7782	100	814	8595	196628	188847			P
R2	1877	100	62808	64684	356837	354961			P
R3	1525	100	60919	62443	446303	444779			P
R4	842	100	204427	205268	367743	384565			F
R5	535	100	62438	63272	445775	444941			P
R6	468	100	287766	288233	413387	412920			P
R7	433	100	62845	63277	136700	137132	358244	357812	F/P
R8	394	100	431948	432341	569460	569853			F
R9	374	100	4933	5306	199917	199544	380908	381281	P/F
R10	229	100	237021	237249	320344	320572			F
R11	210	100	28517	28726	243614	243405			P
R12	204	100	84633	84836	413895	414098			F
R13	190	100	326	515	204717	204528	368033	367844	P
R14	181	100	284825	284645	539224	539404			F
R15	174	100	73673	73846	539296	539469			F
R16	165	100	358549	358713	445775	445939			F
R17	146	100	247536	247681	510485	510630			F
R18	137	100	102129	102265	458421	458557			F
R19	135	100	683	817	204407	204273			P
R20	128	100	136700	136827	445775	445648			P
R21	115	100	683	797	367743	367629			P
R22	109	100	45409	45517	456623	456731			F
R23	109	100	73673	73781	284897	285005			F
R24	107	100	85072	85178	273126	273232			F
R25	103	100	176182	17714	380789	380891			F
R26	97	100	47563	47659	538666	538762			F
R27	91	100	362171	362261	532778	532868			P
R28	88	100	34694	34781	258881	258968			F
R29	88	100	102046	102133	137837	137924			P
R30	88	100	140828	140915	465024	465111			P
R31	86	100	62665	62750	268392	268477	445997	446082	F/ P
R32	82	100	31305	31386	301188	301269			F
R33	81	100	368575	368655	456163	456243			F
R34	80	100	4243	4322	200901	200980	268607	268686	P /F
R35	77	100	28446	28522	243819	243895			P
R36	75	100	333330	333404	429353	429427			P
R37	74	100	11547	11620	134973	135046			F
R38	73	100	41569	41641	438195	438267			F
R39	73	100	268577	268647	539445	539517			F
R40	70	100	189	258	204978	205047	368294	368373	P
R41	66	100	141384	141449	452383	452448			P
R42	65	100	4873	4937	200286	200350	380849	380913	P/F
R43	65	100	200286		380852				P
R44	63	100	141511	141573	452513	452575			F
R45	63	100	41704	41766	438338	438400			F
R46	61	100	47590	475650	275165	275225	538696	538756	P
R47	61	100	432343	432403	569854	569914			F
R48	61	100	73792	73852	285008	285068			F

^aCompare with copy-1 as control. ^bThe letters F and P represent forward repeats and palindromic repeats, respectively. The numbers listed in the starting and ending points refer to positions in the kenaf mt genome sequence (GenBank accession MF163174).

Back to article page

Table 1 Repeats (≥60 bp) in the kenaf mt genome.

Search

Quick links