Table 2 Results of single marker based analyses.

CHR	SNP	POS	A1	MAF	HWE	FUNC	OR_ADD	P_ADD	OR_DOM	P_DOM	OR_REC	P_REC
22	rs2236337	24631041	C	0.35	0.89	untranslated-3	0.97	0.608	0.96	0.590	0.97	0.810
22	rs2236338	24631076	G	0.29	1.00	missense	1.02	0.729	1.02	0.777	1.04	0.771
22	rs74345106	24631185	T	0.02	1.00	missense	0.92	0.698	0.92	0.698	NA	NA
22	rs6573910	24631676	T	0.29	0.72	intron	0.98	0.781	0.98	0.844	0.96	0.774
22	rs6573911	24631727	T	0.33	0.77	intron	1.02	0.716	1.02	0.814	1.05	0.689
22	rs71405867	24632191	G	0.17	1.00	intron	1.02	0.816	1.00	0.973	1.20	0.412
22	rs1126639	24632342	A	0.29	0.88	coding-synon	0.98	0.792	0.99	0.866	0.96	0.760
22	rs11539752	24632383	C	0.29	0.60	missense	0.98	0.755	0.98	0.810	0.96	0.772
22	rs10909625	24632423	C	0.29	1.00	coding-synon	1.03	0.647	1.03	0.671	1.04	0.768
22	rs10873219	24632500	T	0.18	0.77	intron	1.02	0.743	1.01	0.866	1.13	0.578
22	rs59268439	24632691	T	0.12	0.84	intron	0.95	0.562	0.97	0.709	0.71	0.346
22	rs9671454	24632850	C	0.04	0.17	intron	0.96	0.787	0.96	0.755	1.10	0.891
22	rs8192917	24632954	C	0.29	0.78	missense	1.39	1.92 × 10 ⁻⁸	1.43	3.73 × 10 ⁻⁶	1.82	2.77 × 10 ⁻⁶
22	rs2273843	24634203	C	0.16	0.87	intron	1.04	0.605	1.03	0.767	1.21	0.407
22	rs2273844	24634208	A	0.29	0.92	intron	1.04	0.516	1.05	0.534	1.05	0.703

CHR: chromosome; POS: position of SNPs; A1: tested allele; HWE: P values of Hardy-Weinberg Equilibrium; FUNC: functional location of SNP; OR_ADD and P_ADD: odds ratio and P values for SNP coded as additive mode; OR_DOM and P_DOM: odds ratio and P values for SNP coded as dominant mode; OR_REC and P_REC: odds ratio and P values for SNP coded as recessive mode. Significant hit was highlighted in bold.

Quick links

Search