Table 3 Previously reported candidate differentially methylated loci upon soy treatment.
From: Exploratory analysis of the human breast DNA methylation profile upon soymilk exposure
ID | Ensembl ID | Gene Symbol | logFC | t-statistic | P-value | FDR |
|---|---|---|---|---|---|---|
40450702 | ENSG00000012048 | BRCA1 | 0.601571 | 2.318641 | 0.026147 | 0.361056 |
41499320 | ENSG00000077092 | RARB | 0.435366 | 1.918658 | 0.062905 | 0.361056 |
42129392 | ENSG00000161055 | SCGB3A1 | −0.60998 | −1.74276 | 0.089829 | 0.361056 |
41919946 | ENSG00000164362 | TERT | 0.460141 | 1.667295 | 0.104048 | 0.361056 |
39964752 | ENSG00000139618 | BRCA2 | 0.35836 | 1.602313 | 0.11774 | 0.361056 |
40450701 | ENSG00000012048 | BRCA1 | 0.471881 | 1.601995 | 0.11781 | 0.361056 |
42042450 | ENSG00000134982 | APC | −0.55273 | −1.52263 | 0.136503 | 0.361056 |
42129390 | ENSG00000161055 | SCGB3A1 | −0.35985 | −1.49163 | 0.144422 | 0.361056 |
40582446 | ENSG00000206075 | SERPINB5 | 0.362625 | 1.414938 | 0.165595 | 0.365381 |
40450700 | ENSG00000012048 | BRCA1 | 0.332877 | 1.358449 | 0.182691 | 0.365381 |
42129393 | ENSG00000161055 | SCGB3A1 | −0.24687 | −1.15369 | 0.256156 | 0.446046 |
40582443 | ENSG00000206075 | SERPINB5 | −0.30749 | −1.1258 | 0.267628 | 0.446046 |
39692687 | ENSG00000084207 | GSTP1 | 0.196571 | 0.806211 | 0.425363 | 0.624811 |
41919949 | ENSG00000164362 | TERT | −0.17685 | −0.7853 | 0.437368 | 0.624811 |
40582445 | ENSG00000206075 | SERPINB5 | 0.099288 | 0.421192 | 0.676094 | 0.835414 |
42129391 | ENSG00000161055 | SCGB3A1 | −0.08725 | −0.38149 | 0.705056 | 0.835414 |
41919948 | ENSG00000164362 | TERT | −0.10214 | −0.37464 | 0.710102 | 0.835414 |
40582447 | ENSG00000206075 | SERPINB5 | −0.06612 | −0.29675 | 0.768347 | 0.853719 |
41919950 | ENSG00000164362 | TERT | −0.02402 | −0.1002 | 0.920733 | 0.928029 |
40582444 | ENSG00000206075 | SERPINB5 | −0.02584 | −0.09095 | 0.928029 | 0.928029 |
