Table 2 Enrichment of COPD disease module genes in different tissue gene expression data sets with and without seed genes.

From: Integration of Molecular Interactome and Targeted Interaction Analysis to Identify a COPD Disease Network Module

Reference

GEO ID

Tissue

P-value with Seed genes

P-value without seed genes

Shaykhiev29

GSE13896

Alveolar Macrophages I

0.002

0.004

Poliska66

GSE16972

Alveolar Macrophages II

0.037

0.111

Singh31

GSE22148

Sputum

0.018

0.037

Steiling32

GSE37147

Bronchial brushings

0.011

0.011

Bahr64

GSE42057

Peripheral blood mononuclear cell

0.030

0.030

Tedrow 2013

GSE47460

Lung homogenate (Lung I)

0.00026

0.001

Singh63

GSE54837

Blood

0.009

0.009

Bhattacharya65

GSE8581

Lung tissue (Lung II)

0.163

0.061

Back to article page