Figure 10

mIHF contacted regions on the H37Rv chromosome. The upper panel shows the global distribution of mIHF in exponentially growing cells (exp, in black) and in mIHF-depleted cells (dep, red). The number of reads is indicated on the y-axis, while gene length and names are shown on the x-axis. Zoomed images show examples of mIHF binding. (a) mIHF peak at rv0097, whose transcription is 10.5-fold downregulated upon mIHF depletion. (b) No peak is located close to the top upregulated genes rv0196 and rv0197. (c) Third top-scoring peak cluster close to mprA/mprB. (d) Accumulation of peaks around mmpL9. (e) EspA extended promoter region.