Table 1 The screening of genome variation between JHP and CHP compared with the reference genome based on the whole genome resequencing.

From: Identification of candidate genes for leaf scorch in Populus deltoids by the whole genome resequencing analysis

 

JHP

CHP

Total reads

104,104,539

108,920,101

Total size (bp)

4,659,991,276

4,876,051,559

Sequencing depth

36.7261×

38.4297×

Mapped reads

99,154,015 (95.2%)

103,464,008 (95.0%)

Properly paired reads

97,083,229

101,402,196

Consensus sequence (bp)

410,633,296

410,845,308

Genome coverage

95.8%

95.8%

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