Table 1 miRNAs identified by the NanoString nCounter miRNA expression assay in human cumulus granulosa cells. Forty-three of the miRNAs were differentially expressed with a fold change >2 and an FDR < 5%.
From: Characterization of the miRNA regulators of the human ovulatory cascade
miR | logFC CCM2 vs. CCGV | Average Expression CCGV | Average Expression CCM2 | p-value | Adj. p-value | Putative granulosa cell function | References |
|---|---|---|---|---|---|---|---|
hsa-let-7a-5p* | 3.81363 | 3642.69 | 43742.2 | 0.000154 | 0.000256 | Apoptosis, cumulus vs. mural | |
hsa-let-7b-5p | 3.30288 | 2591.97 | 20276.4 | 0.000497 | 0.000693 | ||
hsa-let-7c | 3.87105 | 506.408 | 6725.24 | 3.53E-06 | 2.91E-05 | ||
hsa-let-7d-5p | 3.10472 | 376.498 | 2855.3 | 3.91E-05 | 0.000106 | ||
hsa-let-7e-5p | 3.54614 | 491.637 | 5066.29 | 1.15E-05 | 4.41E-05 | ||
hsa-let-7f-5p* | 2.66036 | 348.055 | 2230.98 | 0.000156 | 0.000256 | ||
hsa-let-7g-5p* | 4.17388 | 1762.22 | 31204.5 | 1.99E-05 | 6.11E-05 | ||
hsa-let-7i-5p | 3.2881 | 279.589 | 2871.92 | 7.02E-06 | 0.000036 | ||
hsa-miR-106a-5p/ miR-17-5p | 1.89582 | 1418.37 | 4268.29 | 0.017636 | 0.019316 | Bovine follicle development | |
hsa-miR-107 | 2.20654 | 289.935 | 1226.41 | 0.000389 | 0.00056 | Bovine follicle development, Steroidogenesis | |
hsa-miR-125a-5p | 3.81061 | 2536.53 | 30936.3 | 9.05E-05 | 0.000189 | Apoptosis | |
hsa-miR-125b-5p | 5.00927 | 2516.64 | 70782.3 | 3.79E-06 | 2.91E-05 | Bovine follicle development, Steroidogenesis, cumulus vs. mural | |
hsa-miR-130a-3p | 3.27081 | 559.043 | 4177.33 | 5.68E-05 | 0.000131 | Bovine follicle development, PCOS | |
hsa-miR-132-3p | 5.59724 | 290.378 | 15338.4 | 3.9E-09 | 8.96E-08 | cumulus vs. mural, Steroidogenesis, PCOS, murine follicle development | |
hsa-miR-15a-5p | 3.15798 | 1280.84 | 10868 | 0.000342 | 0.000507 | Steroidogenesis | |
hsa-miR-15b-5p | 2.42639 | 1952.83 | 8482.74 | 0.004694 | 0.005682 | Steroidogenesis | |
hsa-miR-16-5p | 3.5448 | 1493.38 | 16847.5 | 0.000103 | 0.000206 | Bovine follicle development | |
hsa-miR-181a-5p | 3.82643 | 404.396 | 5005.58 | 7.08E-06 | 0.000036 | cumulus vs. mural, proliferation | |
hsa-miR-191-5p* | 2.80069 | 1557.66 | 10258.1 | 0.001191 | 0.001565 | Bovine follicle development, cumulus vs. mural | |
hsa-miR-19a-3p | 3.09878 | 381.085 | 2980.11 | 4.71E-05 | 0.000114 | Bovine follicle development, Steroidogenesis, PCOS | |
hsa-miR-19b-3p | 3.33449 | 1177.47 | 10517.6 | 0.000143 | 0.000253 | Ovarian hyperstimulation | |
hsa-miR-20a-5p/ miR-20b-5p | 3.85536 | 1094.21 | 16458.7 | 2.87E-05 | 8.26E-05 | cumulus vs. mural | |
hsa-miR-21-5p* | 8.54162 | 21.5677 | 6740.8 | 1.69E-11 | 7.79E-10 | cumulus vs. mural, murine follicle development, apoptosis | |
hsa-miR-223-3p | 2.58013 | 254.152 | 1404.38 | 0.000114 | 0.000216 | cumulus vs. mural, Steroidogenesis, PCOS | |
hsa-miR-22-3p* | 1.75262 | 1807.13 | 4565.75 | 0.041854 | 0.044774 | cumulus vs. mural, Steroidogenesis, PCOS | |
hsa-miR-23b-3p | 2.59206 | 281.984 | 1384.31 | 0.000117 | 0.000216 | Bovine ovary | |
hsa-miR-25-3p | 2.06898 | 1683.34 | 7156.33 | 0.013105 | 0.014703 | Steroidogenesis | |
hsa-miR-29a-3p | 4.94371 | 536.265 | 13587.1 | 5.05E-07 | 7.74E-06 | Steroidogenesis | |
hsa-miR-29b-3p | 3.91754 | 672.73 | 7187.08 | 0.000016 | 5.26E-05 | Steroidogenesis, cumulus vs. mural | |
hsa-miR-302d-3p | −0.25 | 1660.7 | 1305.76 | 0.710 | 0.710** | n/a | |
hsa-miR-34a-5p | 3.09029 | 245.28 | 2018.34 | 8.49E-06 | 0.000036 | Apoptosis | |
hsa-miR-361-5p | 3.15727 | 329.908 | 2675.28 | 1.59E-05 | 5.26E-05 | Murine follicle development | |
hsa-miR-374a-5p | 2.05355 | 841.464 | 2757.13 | 0.007376 | 0.008482 | cumulus vs. mural, | |
hsa-miR-378e | −1.3021 | 3643.64 | 2397.74 | 0.13083 | 0.13678** | Steroidogenesis | |
hsa-miR-424-5p | 4.68931 | 1405.72 | 27294.5 | 7.48E-06 | 0.000036 | Age | |
hsa-miR-4454 | 3.79594 | 2852.29 | 62869.6 | 0.000325 | 0.000498 | n/a | |
hsa-miR-450a-5p | 2.70382 | 1349.62 | 8663.35 | 0.001472 | 0.001881 | Bovine follicle development | |
hsa-miR-451a* | 1.218 | 1669.72 | 3424.96 | 0.176 | 0.180** | cumulus vs. mural | |
hsa-miR-503 | 4.2726 | 750.23 | 13810.1 | 2.66E-06 | 2.91E-05 | Bovine follicle development, | |
hsa-miR-508-3p | 3.27969 | 208.958 | 2839.37 | 8.61E-06 | 0.000036 | PCOS | |
hsa-miR-514a-3p | 2.63133 | 282.897 | 2477.97 | 0.000185 | 0.000294 | PCOS | |
hsa-miR-514b-5p | 1.8413 | 431.937 | 1844.75 | 0.005467 | 0.006449 | PCOS | |
hsa-miR-720 | 3.10848 | 1958.04 | 22615.3 | 0.001832 | 0.002277 | PCOS, Age | |
hsa-miR-93-5p | 3.30979 | 620.555 | 5549.2 | 0.000045 | 0.000114 | Proliferation, PCOS | |
hsa-miR-99a-5p* | 2.89148 | 1585.53 | 10215.6 | 0.000935 | 0.001266 | cumulus vs. mural, Bovine follicle development | |
hsa-miR-99b-5p | 2.74138 | 357.19 | 2252.67 | 7.72E-05 | 0.000169 | Age, Bovine follicle development, PCOS |