Table 1 Summary of all identified variants. Variants of uncertain significance (VUS) are in italics.

From: A new approach based on targeted pooled DNA sequencing identifies novel mutations in patients with Inherited Retinal Dystrophies

Family

Gene

Gene transcript

Allele1

Allele2

Family segregation

cDNA Change

Protein change

Reference

cDNA Change

Protein change

Reference

RP1

EYS

NM_001142800

c.9405T>A

p.Tyr3135Ter

11

c.1830del

p.His610GlnfsTer26

This study

Yes

RP8

CERKL

NM_001030311.2

c.847C>T

p.Arg283Ter

10

c.847C>T

p.Arg283Ter

10

Yes

RP15

USH2A

NM_206933

c.12093del

p.Tyr4031Ter

8

c.11241C>G

p.Tyr3747Ter

This study

Yes

RP17

CHM

NM_000390

c.1272_1273delinsCT

p.Gln425Ter

41

   

Yes

RP27

RPGR

NM_001034853

c.2232_2235del

p.Asp744GlufsTer70

This study

   

Yes

RP34

USH2A

NM_206933

c.2276G>T

p.Cys759Phe

56

c.5278del

p.Asp1760MetfsTer10

8

Yes

RP35

RP1

NM_006269

c.4804C>T

p.Gln1602Ter

67

c.1837dup

p.Thr613AsnfsTer6

This study

Yes

RP49

EYS

NM_001142800

c.4045C>T

p.Arg1349Ter

12

c.4045C>T

p.Arg1349Ter

12

Yes

RP57

TULP1

NM_003322

c.1495 + 1G>C

 

68

c.1495 + 1G>C

 

68

Yes

RP59

MYO7A

NM_000260

c.1200G>T

p.Lys400Asn

69

c.5074C>T

p.Gln1692Ter

This study

N/A

RP77

CNGA1

NM_001142564

c.301C>T

p.Arg101Ter

70

c.1747C>T

p.Arg583Ter

This study

Yes

RP88

MYO7A

NM_000260

c.3763del

p.Lys1255ArgfsTer8

71

c.6_9dup

p.Leu4AspfsTer39

This study

Yes

RP91

USH2A

NM_206933

c.11754G>A

p.Trp3918Ter

72

c.3669del

p.Cys1223Ter

This study

Yes

RP106

EYS

NM_001142800

c.14C>A

p.Ser5Ter

This study

c.888del

p.Lys296AsnfsTer43

This study

Yes

RP117

EYS

NM_001142800

c.4045C>T

p.Arg1349Ter

12

c.9405T>A

p.Tyr3135Ter

11

Yes

RP153

CERKL

NM_001030311.2

c.847C>T

p.Arg283Ter

10

c.847C>T

p.Arg283Ter

10

Yes

RP154

CNGA3

NM_001298

c.162_163insT

p.Arg55Ter

This study

c.162_163insT

p.Arg55Ter

This study

Yes

RP165

ABCA4

NM_000350

c.3322C>T

p.Arg1108Cys

73

c.3322C>T

p.Arg1108Cys

73

Yes

RP67

CERKL

NM_001030311.2

c.847C>T

p.Arg283Ter

10

c.847C>T

p.Arg283Ter

10

Yes

RP109

USH2A

NM_206933

c.1570G>A

p.Ala524Val

This study

c.2276G>T

p.Cys759Phe

56

Yes

RP141

USH2A

NM_206933

c.2276G>T

p.Cys759Phe

56

c.2299del

p.Glu767SerfsTer21

74

Yes

RP173

NR2E3

NM_014249

c.932G>A

p.Arg311Gln

75

c.932G>A

p.Arg311Gln

75

N/A

RP174

RGR

NM_001012720

c.196A>C

p.Ser66Arg

76

c.196A>C

p.Ser66Arg

76

Yes

RP175

CNGB3

NM_019098

c.1148del

p.Thr383IlefsTer13

77

c.852 + 1G>C

 

This study

Yes

RP176

CERKL

NM_001030311.2

c.847C>T

p.Arg283Ter

10

c.847C>T

p.Arg283Ter

10

Yes

RP180

USH2A

NM_206933

c.14565del

p.Asn4856MetfsTer28

This study

c.14565del

p.Asn4856MetfsTer28

This study

Yes

RP182

PDE6A

NM_000440

c.1957C>T

p.Arg653Ter

78

c.1705C>A

p.Gln569Lys

79

Yes

RP185

CNGA3

NM_001298

c.1228C>T

p.Arg410Trp

80

c.829C>G

p.Arg277Gly

81

Yes

RP196

BBS1

NM_024649

c.1220T>G

p.Met390Arg

82

c.1220T>G

p.Met390Arg

82

Yes

RP166

USH2A

NM_206933

c.14091del

p.Phe4697LeufsTer2

7

c.12093del

p.Tyr4031Ter

8

N/A

RP169

CERKL

NM_001030311.2

c.847C>T

p.Arg283Ter

10

c.356G>A

p.Gly119Asp

83

N/A

RP30

RP1

NM_006269

c.1625C>G

p.Ser542Ter

84

c.227T>C

p.Leu76Pro

This study

Yes

RP193

ABCA4

NM_000350

c.4577C>T

p.Thr1526Met

36, 85

c.3386G>T

p.Arg1129Leu

86

N/A

RP200

CRB1

NM_201253

c.444_452del

p.Asp148_Asp150del

87

c.2843G>A

p.Cys948Tyr

88

Yes

RP188

CNGA3

NM_001298

c.1228C>T

p.Arg410Trp

80

c.1706G>A

p.Arg569His

81

N/A

RP40

PRPF31

NM_015629

exons9_13deletion

 

This study

   

Yes

RP148

PRPF8

NM_006445

c.6835T>G

p.Trp2279Gly

This study

    

RP181

PRPF31

NM_015629

c.1165C>T

p.Gln389Ter

This study

   

No

RP92

PCDH15 CDH23

NM_001142763/ NM_022124

c.733C>T

p.Arg245Ter

89

c.8326G>A

p.Gly2776Ser

This Study

Yes