Table 1 Summary of all identified variants. Variants of uncertain significance (VUS) are in italics.
Family | Gene | Gene transcript | Allele1 | Allele2 | Family segregation | ||||
|---|---|---|---|---|---|---|---|---|---|
cDNA Change | Protein change | Reference | cDNA Change | Protein change | Reference | ||||
RP1 | EYS | NM_001142800 | c.9405T>A | p.Tyr3135Ter | c.1830del | p.His610GlnfsTer26 | This study | Yes | |
RP8 | CERKL | NM_001030311.2 | c.847C>T | p.Arg283Ter | c.847C>T | p.Arg283Ter | Yes | ||
RP15 | USH2A | NM_206933 | c.12093del | p.Tyr4031Ter | c.11241C>G | p.Tyr3747Ter | This study | Yes | |
RP17 | CHM | NM_000390 | c.1272_1273delinsCT | p.Gln425Ter | Yes | ||||
RP27 | RPGR | NM_001034853 | c.2232_2235del | p.Asp744GlufsTer70 | This study | Yes | |||
RP34 | USH2A | NM_206933 | c.2276G>T | p.Cys759Phe | c.5278del | p.Asp1760MetfsTer10 | Yes | ||
RP35 | RP1 | NM_006269 | c.4804C>T | p.Gln1602Ter | c.1837dup | p.Thr613AsnfsTer6 | This study | Yes | |
RP49 | EYS | NM_001142800 | c.4045C>T | p.Arg1349Ter | c.4045C>T | p.Arg1349Ter | Yes | ||
RP57 | TULP1 | NM_003322 | c.1495 + 1G>C | c.1495 + 1G>C | Yes | ||||
RP59 | MYO7A | NM_000260 | c.1200G>T | p.Lys400Asn | c.5074C>T | p.Gln1692Ter | This study | N/A | |
RP77 | CNGA1 | NM_001142564 | c.301C>T | p.Arg101Ter | c.1747C>T | p.Arg583Ter | This study | Yes | |
RP88 | MYO7A | NM_000260 | c.3763del | p.Lys1255ArgfsTer8 | c.6_9dup | p.Leu4AspfsTer39 | This study | Yes | |
RP91 | USH2A | NM_206933 | c.11754G>A | p.Trp3918Ter | c.3669del | p.Cys1223Ter | This study | Yes | |
RP106 | EYS | NM_001142800 | c.14C>A | p.Ser5Ter | This study | c.888del | p.Lys296AsnfsTer43 | This study | Yes |
RP117 | EYS | NM_001142800 | c.4045C>T | p.Arg1349Ter | c.9405T>A | p.Tyr3135Ter | Yes | ||
RP153 | CERKL | NM_001030311.2 | c.847C>T | p.Arg283Ter | c.847C>T | p.Arg283Ter | Yes | ||
RP154 | CNGA3 | NM_001298 | c.162_163insT | p.Arg55Ter | This study | c.162_163insT | p.Arg55Ter | This study | Yes |
RP165 | ABCA4 | NM_000350 | c.3322C>T | p.Arg1108Cys | c.3322C>T | p.Arg1108Cys | Yes | ||
RP67 | CERKL | NM_001030311.2 | c.847C>T | p.Arg283Ter | c.847C>T | p.Arg283Ter | Yes | ||
RP109 | USH2A | NM_206933 | c.1570G>A | p.Ala524Val | This study | c.2276G>T | p.Cys759Phe | Yes | |
RP141 | USH2A | NM_206933 | c.2276G>T | p.Cys759Phe | c.2299del | p.Glu767SerfsTer21 | Yes | ||
RP173 | NR2E3 | NM_014249 | c.932G>A | p.Arg311Gln | c.932G>A | p.Arg311Gln | N/A | ||
RP174 | RGR | NM_001012720 | c.196A>C | p.Ser66Arg | c.196A>C | p.Ser66Arg | Yes | ||
RP175 | CNGB3 | NM_019098 | c.1148del | p.Thr383IlefsTer13 | c.852 + 1G>C | This study | Yes | ||
RP176 | CERKL | NM_001030311.2 | c.847C>T | p.Arg283Ter | c.847C>T | p.Arg283Ter | Yes | ||
RP180 | USH2A | NM_206933 | c.14565del | p.Asn4856MetfsTer28 | This study | c.14565del | p.Asn4856MetfsTer28 | This study | Yes |
RP182 | PDE6A | NM_000440 | c.1957C>T | p.Arg653Ter | c.1705C>A | p.Gln569Lys | Yes | ||
RP185 | CNGA3 | NM_001298 | c.1228C>T | p.Arg410Trp | c.829C>G | p.Arg277Gly | Yes | ||
RP196 | BBS1 | NM_024649 | c.1220T>G | p.Met390Arg | c.1220T>G | p.Met390Arg | Yes | ||
RP166 | USH2A | NM_206933 | c.14091del | p.Phe4697LeufsTer2 | c.12093del | p.Tyr4031Ter | 8 | N/A | |
RP169 | CERKL | NM_001030311.2 | c.847C>T | p.Arg283Ter | c.356G>A | p.Gly119Asp | N/A | ||
RP30 | RP1 | NM_006269 | c.1625C>G | p.Ser542Ter | c.227T>C | p.Leu76Pro | This study | Yes | |
RP193 | ABCA4 | NM_000350 | c.4577C>T | p.Thr1526Met | c.3386G>T | p.Arg1129Leu | N/A | ||
RP200 | CRB1 | NM_201253 | c.444_452del | p.Asp148_Asp150del | c.2843G>A | p.Cys948Tyr | Yes | ||
RP188 | CNGA3 | NM_001298 | c.1228C>T | p.Arg410Trp | c.1706G>A | p.Arg569His | N/A | ||
RP40 | PRPF31 | NM_015629 | exons9_13deletion | This study | Yes | ||||
RP148 | PRPF8 | NM_006445 | c.6835T>G | p.Trp2279Gly | This study | ||||
RP181 | PRPF31 | NM_015629 | c.1165C>T | p.Gln389Ter | This study | No | |||
RP92 | PCDH15 CDH23 | NM_001142763/ NM_022124 | c.733C>T | p.Arg245Ter | c.8326G>A | p.Gly2776Ser | This Study | Yes | |