Figure 9

(A) Phytase protein simulation. The residues that are more sensitive to ROS and RNS are represented within the semitransparent surface of the protein. Met, Cys, Tyr, and Trp are colored in orange, black, blue, and red, respectively. The His and Asp residues in the catalytic site are colored in atom type and marked by a circle. (B) (a) RMSF per residue for native and modified phytase. The RMSF was calculated by best fitting the carbon alpha of the trajectory. Related secondary structures are assigned (b) RMSD during the simulation time for Native and modified structures.