Table 2 Assembly and scaffolding statistics for de novo T. rubripes and T. stictonotus genomes, as well as for FUGU4 and FUGU5, which are published T. rubripes reference genomes.

From: Artificially designed hybrids facilitate efficient generation of high-resolution linkage maps

 

N50 (bp)

Sum of scaffold/contig sizes (bp)

Max size of scaffolds/contigs (bp)

Number of scaffolds/contigs

Takifugu rubripes (T. rubripes scaffolds/contigs)

13,002

326,596,034

158,829

72,571

Takifugu stictonotus (T. stictonotus scaffolds/contigs)

15,925

336,757,840

164,291

78,881

FUGU4

858,115

393,296,343

7,245,445

7,213

FUGU5

11,516,971

391,484,715 (Located: 86%, Oriented: 72%)

23,260,604

6,835

  1. N50, the shortest sequence length at 50% of the genome; sum, total scaffold length; max, maximum scaffold length; n, number of scaffolds. (*1) These data do not reflect the scaffolds/contigs located but not oriented.
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