Table 1 Summary of deep-sequencing results of the BrYV amplicon-transformed Arabidopsis lines and Col-0.
Index | Clean reads | Q20 (%) | GC content (%) | Total mapped | Reads map to ‘+’ | Reads map to ‘−’ | Non-splice reads | Splice reads |
|---|---|---|---|---|---|---|---|---|
Col-0 | 52467312 | 96.7 | 47.01 | 46289246 (88.22%) | 22980403 (43.8%) | 22993473 (43.82%) | 28980234 (55.23%) | 16993642 (32.39%) |
111 | 61938584 | 96.61 | 45.88 | 54647592 (88.23%) | 26991146 (43.58%) | 26999520 (43.59%) | 32493191 (52.46%) | 21497475 (34.71%) |
412 | 57304230 | 96.5 | 45.98 | 50292106 (87.76%) | 24959313 (43.56%) | 24969592 (43.57%) | 30079642 (52.49%) | 19849263 (34.64%) |
