Table 1 Top up-regulated gene-sets in horses with asthma following challenge, ranked according to lowest rank at maximum score.

From: Gene set enrichment analysis of the bronchial epithelium implicates contribution of cell cycle and tissue repair processes in equine asthma

Name of gene set

Size of gene set

NES^

FDR*

Rank at max

Granulocyte chemotaxis - gobp - go:0071621

19

2.01

2.24E-04

16

Granulocyte migration - gobp - go:0097530

19

1.98

4.43E-04

16

Neutrophil chemotaxis - gobp - go:0030593

15

1.94

7.41E-04

16

Neutrophil migration - gobp - go:1990266

15

1.93

9.06E-04

16

Myeloid leukocyte migration - gobp - go:0097529

31

1.80

5.83E-03

16

Leukocyte chemotaxis - gobp - go:0030595

46

1.69

2.03E-02

16

Positive regulation of cytokine secretion - gobp - go:0050715

33

1.61

4.11E-02

68

Negative regulation of inflammatory response - gobp - go:0050728

30

1.67

2.56E-02

134

Cell separation after cytokinesis - gobp - go:0000920

18

1.73

1.35E-02

140

Chemokine receptor binding - gomf - go:0042379

22

1.95

5.97E-04

164

  1. ^Normalized enrichment score.
  2. *False discovery rate.
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