Table 1 X-ray data collection and refinement statistics for MjTX-II/RA and MjTX-II/ASA structures.

From: Search for efficient inhibitors of myotoxic activity induced by ophidian phospholipase A2-like proteins using functional, structural and bioinformatics approaches

 

MjTX-II/RA

MjTX-II/ASA

Space Group

P212121

P21

Unit Cell (Å, °)

a = 46.1; b = 65.8; c = 90.4

a = 39.6; b = 65.6; c = 55.1; β = 92.7

Resolution range (Å)

23.55–1.59 (1.65–1.59)

18.32–1.69 (1.75–1.69)

Unique reflections

37011 (3613)

29552 (2767)

Multiplicity

9.7 (4.7)

3.3 (3.2)

Completeness (%)

99.7 (98.7)

94.0 (88.9)

Mean I/σ (I)

21.82 (3.0)

16.3 (2.4)

Molecules in ASU

2

2

Matthews coefficient VM3Da−1)

2.5

2.5

Rmergeb (%)

10.5 (72.3)

4.9 (53.3)

Reflections used in refinement

37010 (3613)

29545 (2764)

Reflections used for Rfree

1851 (181)

1441 (129)

R work

15.8 (20.7)

17.9 (23.4)

R free

19.0 (23.7)

21.8 (28.7)

Number of non-hydrogen atoms

Protein

1913

1908

Water

392

314

Ligands

26

38

Rosmarinic acid / CC

1/0.8

Acetylsalicylic acid / CC

2/0.8; 0.8

Average B-factor

Overall

21.3

25.2

Protein

18.9

23.6

Ligands

35.4

39.1

Solvent

31.9

33.8

Ramachandran Plot (%)c

Favored

97.1

96.7

Outliers

0

0

Rotamer outliers (%)

1.4

0

Cβ outliers

0

0

Clash score

3.17

6.84

RMS (bonds) (Å)

0.013

0.013

RMS (angles) (°)

1.57

1.16

  1. Numbers in parenthesis are for the highest resolution shell.