Table 5 Innate immune cell marker comparison.
Gene Symbol | ^Our pooled IC Mean | #Chen et al.22 pooled IC Mean^ | ^Our Single cell IC Mean (n = 4) | ^Our pooled PC Mean | #Chen et al.22 pooled PC Mean^ |
|---|---|---|---|---|---|
Antimicrobial peptide genes | |||||
Adm | 161.7 | 123.6 | not detected | 40.4 | 72.6 |
Defb1 | 8210.5 | 1973.5 | 598.2 | 5797.2 | 1263.2 |
Scg5 | 240.6 | 52.6 | 26.7 | 186.0 | 41.2 |
Bacteriostatic nutrient metal scavenger genes | |||||
Lcn2 | 0.6 | 14.4 | not detected | 63.0 | 120.6 |
S100g | 46394.7 | 4462.4 | 5267.5 | 18584.8 | 1229.6 |
S100a11 | 557.7 | 743.2 | 16 | 777.8 | not listed |
Phagocytosis/endocytosis genes | |||||
Cav1 | 202.0 | 104.2 | not detected | 128.8 | 497.2 |
Cav2 | 450.0 | 388.7 | not detected | 213.6 | 759.4 |
Rab7 | 3710.2 | 314.7 | 8.25 | 2988.7 | 279.9 |
Inflammatory signaling genes | |||||
Irf3 | 321.7 | 39.5 | 98 | 333.7 | 47.9 |
Il1r1 | 113.7 | 17.6 | not detected | 83.1 | 26.9 |
Apoe | 1245.8 | 419.7 | 422.3 | 1766.0 | 2420.0 |
Spp1 | 18131 | 3524 | 1715.7 | 14659.5 | 1556.8 |
Mmp11 | 8 | 8.6 | 128.5 | not detected | 4.7 |
Klk1 | 124448 | 6039.2 | 4927 | 66958.6 | 899.8 |
Pattern recognition receptor genes | |||||
Tlr1 | 1.3 | 6.2 | not detected | 22.5 | 13.3 |
Tlr2 | nd | 8.4 | not detected | not detected | 26.8 |
Tlr3 | 130.6 | 13.4 | not detected | 138.4 | 9.5 |
Tlr4 | not detected | 3.6 | not detected | not detected | 13.9 |
Tril | 4.9 | 2.3 | not detected | 25.6 | 8.88 |
Inflammasome genes | |||||
Nlrc3 | 34.4 | 0.5 | not detected | 27.1 | 0.7 |
Naip1 | not detected | 0.1 | not detected | not detected | not listed |