Table 1 Ordered genotypes with their respective population genotype frequencies, number of B-alleles (gene count), breeding values (BVs) as father and as mother and parent-of-origin effects (POEs). The allele frequencies of B and b are denoted by p and q = 1 − p. The parameters α and i are the allele-substitution effect and the imprinting effect.

From: Scanning the genomes of parents for imprinted loci acting in their un-genotyped progeny

genotype

frequency

gene count

BV as father

BV as mother

POE

BB

p 2

2

2q(α + i)

2q(α − i)

2qi

Bb

pq

1

(q − p)(α + i)

(q − p)(α − i)

(q − p)i

bB

pq

1

(q − p)(α + i)

(q − p)(α − i)

(q − p)i

bb

q 2

0

− 2p(α + i)

− 2p(α − i)

− 2pi