Table 1 The kinetic parameter (±SD) of different DapDH for different substrate with NADPH or NADP+ as cofactora.

From: Overexpression of thermostable meso-diaminopimelate dehydrogenase to redirect diaminopimelate pathway for increasing L-lysine production in Escherichia coli

Enzymes

Cofactor

Reaction

Substrate

Vmax (U/mg)

Km (mmol/L)

Kcat (/s)

Kcat/Km

CgDapDH

NADPH

Amination

THDPA

2.1 ± 0.3

0.27 ± 0.02

41.9 ± 4.4

155.2

\({{\rm{NH}}}_{4}^{+}\)

38.4 ± 3.4

39.2 ± 6.5

768.3 ± 62.5

23.8

NADP+

Deamination

meso-DAP

5.8 ± 0.6

2.8 ± 0.3

115.4 ± 15.8

41.2

BsDapDH

NADPH

Amination

THDPA

3.2 ± 0.2

0.23 ± 0.05

64.7 ± 7.3

281.3

\({{\rm{NH}}}_{4}^{+}\)

25.6 ± 2.3

10.8 ± 1.02

511.9 ± 27.6

47.4

NADP+

Deamination

meso-DAP

7.7 ± 0.5

2.4 ± 0.1

154.2 ± 0.4

64.3

CtDapDH

NADPH

Amination

THDPA

13.9 ± 0.3

0.11 ± 0.03

278.2 ± 25.3

2318.3

\({{\rm{NH}}}_{4}^{+}\)

90.8 ± 10.1

89 ± 14.2

1815.6 ± 125.3

205.4

NADP+

Deamination

meso-DAP

17.2 ± 1.3

0.21 ± 0.05

344.3 ± 31.4

1638.6

StDapDH

NADPH

Amination

THDPA

2.7 ± 0.1

0.24 ± 0.3

52.8 ± 4.5

220.0

\({{\rm{NH}}}_{4}^{+}\)

19.4 ± 2.6

6.3 ± 0.7

387.4 ± 45.3

61.5

NADP+

Deamination

meso-DAP

7.3 ± 0.5

1.8 ± 0.08

145.7 ± 1.4

80.9

BfDapDH

NADPH

Amination

THDPA

0.24 ± 0.03

0.57 ± 0.14

4.9 ± 0.3

8.6

\({{\rm{NH}}}_{4}^{+}\)

8.04 ± 0.96

4.2 ± 0.5

160.8 ± 21.2

38.3

NADP+

Deamination

meso-DAP

0.39 ± 0.05

0.11 ± 0.02

7.7 ± 0.4

70.0

UtDapDH

NADPH

Amination

THDPA

2.5 ± 0.1

0.26 ± 0.3

50.6 ± 4.5

194.6

\({{\rm{NH}}}_{4}^{+}\)

17.3 ± 2.2

6.5 ± 0.5

347.7 ± 25.8

53.4

NADP+

Deamination

meso-DAP

6.2 ± 0.4

1.9 ± 0.2

123.3 ± 9.4

64.9

  1. aThe mixture for measuring NADPH oxidation contained 200 mmol/L Na2CO3-NaHCO3 (pH 8.5), 0.5 mmol/L NADPH, 200 mmol/L NH4Cl, 5.0 mmol/L THDPA and 25 μg of pure recombinant DapDH. The production of NADP+ was monitored continuously at A340. The mixture for measuring NADP+ reduction contained 200 mmol/L Na2CO3-NaHCO3 (pH 10.0), 5 mmol/L meso-DAP, 0.5 mmol/L NADP+ and 25 μg of pure recombinant DapDH. The production of NADPH was monitored continuously at A340. The kinetic parameters were determined by varying substrate concentrations while keeping the co-substrate level constant at the set concentration. All assays were carried out at 30 °C.
  2. All data are meaning values of three determinations of three independent experiments with ±SD.