Table 1 Variations of the expression of eut genes.
From: Metabolic adaptation of adherent-invasive Escherichia coli to exposure to bile salts
name | gene size | RNA-seq values (minimal medium) | RNA-seq values (bile salts) | Fold change | Fold change | p value |
|---|---|---|---|---|---|---|
(bp) | RPKM | RPKM | (Log2) | |||
eutA | 1403 | 36 | 223 | 6.3 | 2.65 | 2.151E-13 |
eutB | 1361 | 61 | 358 | 5.9 | 2.55 | 1.818E-17 |
eutC | 887 | 47 | 286 | 6.1 | 2.60 | 5.747E-17 |
eutD | 1016 | 108 | 357 | 3.3 | 1.72 | 2.746E-11 |
eutE | 1403 | 14 | 149 | 10.4 | 3.38 | 1.849E-16 |
eutG | 1187 | 35 | 168 | 4.9 | 2.28 | 2.691E-11 |
eutH | 1226 | 106 | 514 | 4.8 | 2.27 | 1.172E-15 |
eutJ | 836 | 13 | 147 | 11.3 | 3.50 | 8.290E-18 |
eutK | 500 | 37 | 94 | 2.5 | 1.34 | 9.218E-05 |
eutL | 659 | 30 | 126 | 4.2 | 2.08 | 1.825E-09 |
eutM | 335 | 55 | 177 | 3.2 | 1.69 | 1.128E-05 |
eutN | 287 | 5 | 62 | 12.2 | 3.61 | 1.249E-12 |
eutP | 479 | 39 | 166 | 4.2 | 2.08 | 7.469E-10 |
eutQ | 701 | 24 | 192 | 8.1 | 3.01 | 1.052E-12 |
eutR | 1052 | 142 | 308 | 2.2 | 1.12 | 3.639E-05 |
eutS | 335 | 20 | 76 | 3.9 | 1.96 | 8.018E-07 |
eutT | 803 | 13 | 83 | 6.4 | 2.68 | 6.423E-10 |
