Figure 4 | Scientific Reports

Figure 4

From: Integrated single-base resolution maps of transcriptome, sRNAome and methylome of Tomato yellow leaf curl virus (TYLCV) in tomato

Figure 4

Maps from TYLCV vsRNA. Tomato plants by either agroinoculation (Agrob-TYLCV) or using B. tabaci (Bemisia-TYLCV). Data from different time points during the systemic infection (7, 14 and 21 dpi) are shown. The graphs plot the number of (A) 20–25 nt vsRNA or (B) 21, 22 and 24-nt vsRNA reads, at each nucleotide position of TYLCV genome (2781 nt). Bars above the axis (blue) represent sense reads starting at each respective position and those below (red) represent antisense reads ending at that position (please note the differences in the scale between 7 dpi and the other two time points). One representative biological replicate is shown (replicate number is indicated in Table S2). The genome organization of TYLCV is shown schematically above the graphs. The predicted viral ORFs are shown as grey arrows and the IR as a dark rectangle.

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