Table 2 The top 20 gene families (orthogroups, OGs) that show the greatest expansion in the M. capitata genome assembly when compared to A. digitifera.
Representative gene | OG | M. capitata Count | A. digitifera Count | Fold change | Annotation |
|---|---|---|---|---|---|
g11509.t1 | OG0000083 | 92 | 1 | 92 | 5-hydroxytryptamine receptor 1-like |
g10335.t1 | OG0000184 | 88 | 1 | 88 | Transposon polyprotein* |
Monca.adi2mcaRNA34736_R8 | OG0000188 | 83 | 1 | 83 | Retrovirus-related Pol polyprotein* |
Monca.adi2mcaRNA22274_R1 | OG0000273 | 79 | 1 | 79 | Integrator complex subunit 3-like* |
Monca.adi2mcaRNA32317_R1 | OG0000247 | 75 | 1 | 75 | Uncharacterized protein |
Monca.adi2mcaRNA782_R1 | OG0000264 | 75 | 1 | 75 | Uncharacterized protein |
g10303.t1 | OG0000239 | 75 | 1 | 75 | Hypothetical protein |
Monca.adi2mcaRNA17438_R1 | OG0000263 | 73 | 1 | 73 | Transposon Tf2–6 polyprotein* |
Monca.adi2mcaRNA28536_R2 | OG0000270 | 67 | 1 | 67 | Uncharacterized protein |
g10743.t1 | OG0000298 | 67 | 1 | 67 | Zinc finger CCHC domain |
Monca.adi2mcaRNA13434_R2 | OG0000427 | 64 | 1 | 64 | Tcb2 transposase* |
Monca.adi2mcaRNA20397_R5 | OG0000369 | 59 | 1 | 59 | ATP-binding cassette sub-family b |
Monca.adi2mcaRNA20797_R1 | OG0000159 | 110 | 2 | 55 | Sentrin-specific protease 3 |
g1002.t1 | OG0000442 | 52 | 1 | 52 | Protein sidekick-2 |
Monca.adi2mcaRNA12306_R4 | OG0000127 | 102 | 2 | 51 | RNA-directed DNA polymerase* |
g12976.t1 | OG0000602 | 50 | 1 | 50 | Uncharacterized protein |
g13456.t1 | OG0000465 | 48 | 1 | 48 | Uncharacterized protein |
Monca.adi2mcaRNA15668_R1 | OG0000016 | 286 | 6 | 47 | RNA-directed DNA polymerase* |
Monca.adi2mcaRNA36640_R7 | OG0000548 | 47 | 1 | 47 | Uncharacterized protein |
Monca.adi2mcaRNA27782_R0 | OG0000452 | 46 | 1 | 46 | Uncharacterized protein |
