Table 1 Summary statistics of the linkage groups constructed using the population arising from the cross ‘Maehyang × Albion’ along with their physical distances on the F. vesca_v4.0.a1 genome sequences.
SL | Linkage group | Length (cM) | First and last mapped marker | Total no. of mapped markers | Average interval (cM/locus) | Longest gap (cM) | F. vesca chromo-some | LG physical start (bp)a | LG physical end (bp)b | Physical Span (bp)c |
|---|---|---|---|---|---|---|---|---|---|---|
1 | LG1A | 95.25 | FAN4524-FAN3690 | 54 | 1.76 | 9.64 | Fvb1 | 112529 | 16227481 | 16114952 |
2 | LG1B1 | 55.99 | FAN4683-FAN4149 | 17 | 3.29 | 7.78 | Fvb1 | 144009 | 4479442 | 4335433 |
3 | LG1B2 | 46.33 | FAN722-FAN1648 | 18 | 2.57 | 6.47 | Fvb1 | 1383360 | 5403172 | 4019812 |
4 | LG1C1 | 50.53 | FAN379-FAN195 | 26 | 1.94 | 8.31 | Fvb1 | 6183315 | 10129223 | 3945908 |
5 | LG1C2 | 29.13 | FAN986-FAN1451 | 23 | 1.27 | 7.36 | Fvb1 | 7969400 | 20650547 | 12681147 |
6 | LG1D1 | 83.11 | FAN3231-FAN4379 | 34 | 2.44 | 9.88 | Fvb1 | 3921057 | 18970557 | 15049500 |
7 | LG1D2 | 58.98 | FAN2399-FAN3722 | 28 | 2.11 | 6.76 | Fvb1 | 7438667 | 19123178 | 11684511 |
8 | LG2A1 | 48.88 | FAN578-FAN708 | 24 | 2.04 | 7.14 | Fvb4 | 804175 | 11904624 | 11100449 |
9 | LG2A2 | 41.55 | FAN1639-FAN888 | 20 | 2.08 | 6.38 | Fvb4 | 425782 | 13276588 | 12850806 |
10 | LG2B | 69.78 | FAN4435-FAN2296 | 45 | 1.55 | 7.09 | Fvb2 | 267888 | 28873870 | 28605982 |
11 | LG2C1 | 51.38 | FAN1395-FAN1208 | 23 | 2.23 | 7.86 | Fvb2 | 5674815 | 29167427 | 23492612 |
12 | LG2C2 | 32.94 | FAN4648-FAN3287 | 15 | 2.20 | 8.59 | Fvb2 | 15750516 | 19803671 | 4053155 |
13 | LG2D1 | 48.82 | FAN3904-FAN3422 | 30 | 1.63 | 13.42 | Fvb2 | 24250389 | 29150635 | 4900246 |
14 | LG2D2 | 28.93 | FAN3803-FAN2729 | 9 | 3.21 | 8.09 | Fvb2 | 21804777 | 26832106 | 5027329 |
15 | LG3A1 | 69.38 | FAN5-FAN1270 | 29 | 2.39 | 11.75 | Fvb3 | 26607 | 12531139 | 12504532 |
16 | LG3A2 | 71.72 | FAN1772-FAN471 | 28 | 2.56 | 19.38 | Fvb3 | 2288930 | 37706799 | 35417869 |
17 | LG3B1 | 55.36 | FAN3902-FAN3420 | 25 | 2.21 | 4.12 | Fvb3 | 3610045 | 14574195 | 10964150 |
18 | LG3B2 | 48.96 | FAN2357-FAN3427 | 19 | 2.58 | 11.49 | Fvb3 | 8122733 | 13333825 | 5211092 |
19 | LG3C1 | 56.48 | FAN639-FAN1500 | 20 | 2.82 | 10.76 | Fvb3 | 12328117 | 36511410 | 24183293 |
20 | LG3C2 | 72.33 | FAN1607-FAN1528 | 29 | 2.49 | 6.38 | Fvb3 | 17089842 | 38167538 | 21077696 |
21 | LG3D1 | 34.68 | FAN3688-FAN4482 | 21 | 1.65 | 10.02 | Fvb3 | 33191108 | 37766726 | 4575618 |
22 | LG3D2 | 40.92 | FAN2345-FAN2466 | 14 | 2.92 | 12.77 | Fvb3 | 30017669 | 38165007 | 8147338 |
23 | LG4A1 | 55.10 | FAN3622-FAN2319 | 21 | 2.62 | 12.32 | Fvb4 | 1372325 | 19654576 | 18282251 |
24 | LG4A2 | 45.95 | FAN1912-FAN1940 | 15 | 3.28 | 6.75 | Fvb4 | 572887 | 22338700 | 21765813 |
25 | LG4B1 | 32.73 | FAN2769-FAN4509 | 10 | 3.27 | 14.41 | Fvb4 | 2824575 | 4495688 | 1671113 |
26 | LG4B2 | 52.26 | FAN770-FAN2079 | 29 | 1.80 | 5.34 | Fvb4 | 6686516 | 27802611 | 21116095 |
27 | LG4C | 57.91 | FAN2026-FAN802 | 51 | 1.14 | 3.89 | Fvb4 | 344401 | 33602364 | 33257963 |
28 | LG4D | 80.28 | FAN4418-FAN4506 | 66 | 1.22 | 8.99 | Fvb4 | 1119936 | 33498276 | 32378340 |
29 | LG5A1 | 47.20 | FAN564-FAN1164 | 13 | 3.63 | 13.32 | Fvb5 | 319932 | 2289061 | 1969129 |
30 | LG5A2 | 44.43 | FAN34-FAN55 | 13 | 3.42 | 13.37 | Fvb5 | 7581891 | 9861778 | 2279887 |
31 | LG5B | 81.79 | FAN1402-FAN1895 | 24 | 3.41 | 20.94 | Fvb5 | 3768759 | 18410022 | 14641263 |
32 | LG5C | 72.80 | FAN23-FAN277 | 54 | 1.35 | 4.47 | Fvb5 | 130730 | 15080365 | 14949635 |
33 | LG5D | 115.84 | FAN3920-FAN3267 | 73 | 1.59 | 11.00 | Fvb5 | 21228806 | 27416727 | 6187921 |
34 | LG6A1 | 61.62 | FAN3018-FAN4591 | 38 | 1.62 | 6.24 | Fvb6 | 2083928 | 7251058 | 5167130 |
35 | LG6A2 | 45.34 | FAN1259-FAN1931 | 23 | 1.97 | 10.04 | Fvb6 | 70354 | 11645796 | 11575442 |
36 | LG6B1 | 54.78 | FAN1173-FAN1487 | 41 | 1.34 | 5.05 | Fvb6 | 1660733 | 10248262 | 8587529 |
37 | LG6B2 | 55.64 | FAN3781-FAN3954 | 31 | 1.79 | 7.67 | Fvb6 | 5864047 | 15255602 | 9391555 |
38 | LG6C1 | 35.35 | FAN2722-FAN2922 | 25 | 1.41 | 3.31 | Fvb6 | 10630696 | 20387841 | 9757145 |
39 | LG6C2 | 75.55 | FAN675-FAN570 | 25 | 3.02 | 10.68 | Fvb6 | 3657849 | 27953227 | 24295378 |
40 | LG6D1 | 43.69 | FAN3811-FAN3854 | 35 | 1.25 | 4.88 | Fvb6 | 30923227 | 39197465 | 8274238 |
41 | LG6D2 | 51.45 | FAN616-FAN1739 | 28 | 1.84 | 6.17 | Fvb6 | 15955826 | 37293159 | 21337333 |
42 | LG7A | 68.14 | FAN3436-FAN4253 | 19 | 3.59 | 10.79 | Fvb7 | 1700487 | 8698128 | 6997641 |
43 | LG7B | 64.28 | FAN1537-FAN656 | 29 | 2.22 | 7.15 | Fvb7 | 7860566 | 22021634 | 14161068 |
44 | LG7C1 | 52.37 | FAN3699-FAN4557 | 26 | 2.01 | 7.16 | Fvb7 | 5168144 | 20476274 | 15308130 |
45 | LG7C2 | 40.51 | FAN458-FAN180 | 26 | 1.56 | 7.56 | Fvb7 | 17500684 | 24064058 | 6563374 |
46 | LG7D | 55.15 | FAN170-FAN1606 | 27 | 2.04 | 8.11 | Fvb7 | 16557672 | 24078363 | 7520691 |
Total | n/a | 2581.57 | n/a | 1268 | 2.22 | n/a | n/a | n/a | n/a | 184.33 Mb d |