Table 4 Functional enrichment in gene ontology (GO) terms and KEGG pathways of A and P monogenomic expressing (MGE) gene groups in diploid (PA) and triploid (PAA) libraries irrespective of the source tissue type.

From: Allele-specific expression variation at different ploidy levels in Squalius alburnoides

 

MGE

 

Term description

#

p

PA

P

BP

ATP biosynthetic process

4

8,00E-02

CC

respiratory chain

4

3,90E-02

A

BP

peptide biosynthetic process

3

4,50E-02

BP

peptide metabolic process

3

3,80E-02

BP

cellular amide metabolic process

3

4,10E-02

MF

structural molecule activity

4

1,90E-03

MF

structural constituent of ribosome

3

7,40E-03

PAA

P

BP

carbohydrate derivative biosynthetic process

8

4,50E-02

A

BP

translation

5

1,00E-02

BP

peptide biosynthetic process

5

5,50E-03

BP

amide biosynthetic process

5

5,20E-03

BP

peptide metabolic process

5

4,90E-03

BP

cellular amide metabolic process

5

7,20E-03

BP

organonitrogen compound biosynthetic process

5

1,60E-02

MF

structural constituent of ribosome

4

2,60E-03

MF

structural molecule activity

4

1,80E-02

KE

Ribosome

3

2,80E-02

  1. (BP) Biological process, (MF) molecular function, (CC) cellular component, (KE) KEGG pathway, (NS) no significant enrichment, (#) number of transcripts, (p) Benjamini corrected p-value. GO enrichment analysis was performed considering all levels of classification of terms.