Table 5 Transcripts with consistent P and consistent A monogenomic transcriptional contribution regardless of sample type and ploidy level.

From: Allele-specific expression variation at different ploidy levels in Squalius alburnoides

MGE

Unigene ID

Ref. Gene ID

Ref. Sequence

Symbol

Definition

P

Unigene101062

gi|318054652

NP_001187754.1

NDUFC2

NADH dehydrogenase (ubiquinone) 1 subunit c2 [Ictalurus punctatus]

Unigene114185

gi|41053742

NP_957180.1

GCDH

Glutaryl-CoA dehydrogenase a [Danio rerio].

Unigene2212

NaN

   

Unigene43419

gi|47087309

NP_998647.1

ABCD3

ATP-binding cassette sub-family D member 3 [Danio rerio]

Unigene45629

gi|41055873

NP_957287.1

 

Uncharacterized protein LOC393968 [Danio rerio]

Unigene48654l

gi|47550715

NP_999871.1

HNRNPA0

Heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]

A

Unigene100595

gi|18859307

NP_571384.1

Ran

GTP-binding nuclear protein Ran [Danio rerio]

Unigene101028

gi|18858719

NP_571660.1

FTH1

Ferritin heavy chain [Danio rerio]

Unigene114523

gi|47523975

NP_998887.1

SLC25A3

Solute carrier family 25 member 3 [Danio rerio]

Unigene122169

gi|225715740

gb|ACO13716.1

TIMM8A

Mitochondrial import inner membrane translocase subunit Tim8 A [Esox lucius]

Unigene134826

gi|51010975

NP_001003447.1

RPL15

60S ribosomal protein L15 [Danio rerio]

Unigene140252

gi|124300811

dbj|BAF45901.1

RPS13

Ribosomal protein S13 [Solea senegalensis]

Unigene146647

gi|55250139

gb|AAH85596.1

 

Zgc:153867 protein [Danio rerio]

Unigene23269

gi|47086529

NP_997925.1

RPL17

60S ribosomal protein L17 [Danio rerio]

  1. MGE- monogenomic expression; UniGene ID from the de novo transcriptome assembly of S. alburnoides complex; Ref. Gene ID- Gene ID.