Table 1 Candidate T-cell epitopes on the P17 and P18 peptide of the BgQ1m molecule.
Peptide | Amino acid sequencea | Estimated scores for restriction moleculesb | |||||
|---|---|---|---|---|---|---|---|
BIMAS | SYFPEITHI | ||||||
Dd | Kd | Ld | Dd | Kd | Ld | ||
P17 | RLKPLTAMTAIAFCPMTSKL | ||||||
AFCPMTSKL | 1 | 1382.4 | — | — | 20 | 12 | |
KPLTAMTAI | 0.6 | 115.2 | 30 | — | 22 | 18 | |
FCPMTSKL | 24 | 48 | — | — | — | — | |
IAFCPMTSKL | 1 | 48 | 5 | — | 12 | — | |
KPLTAMTAIA | 0.12 | 2.88 | 30 | — | 11 | — | |
P18 | IAFCPMTSKLELRQNYRLEK | ||||||
AFCPMTSKL | 1 | 1382.4 | 5 | — | 20 | 12 | |
CPMTSKLEL | 0.3 | 115.2 | 150 | — | 17 | 22 | |
FCPMTSKL | 7.2 | 57.6 | 7.5 | — | 11 | — | |
IAFCPMTSKL | 1 | 48 | 5 | — | 12 | — | |
KLELRQNYRL | 1.2 | 48 | 1.5 | — | 12 | — | |
