Table 2 BCR sequencing data summary for biliary remnants and lymph nodes.
From: Oligoclonal immunoglobulin repertoire in biliary remnants of biliary atresia
Biliary remnants | Reads | Distinct CDR3s | D50 | Frequency top 100 CDR3s |
|---|---|---|---|---|
iBA1 | 966609 | 2349 | 0.1 | 97.9% |
iBA2 | 712470 | 6293 | 0.2 | 93.5% |
iBA3 | 504036 | 3189 | 0.3 | 95.8% |
iBA4 | 808102 | 4997 | 0.2 | 94.4% |
iBA6 | 113811 | 1277 | 0.5 | 96.5% |
iBA8 | 567690 | 12631 | 0.9 | 53.8% |
iBA9 | 538696 | 12891 | 0.9 | 51.3% |
iBA11 | 224469 | 2327 | 0.4 | 95.8% |
BASM12 | 127299 | 2089 | 0.5 | 95.0% |
BASM14 | 584857 | 9361 | 0.6 | 69.3% |
BASM15 | 584219 | 7365 | 0.4 | 87.1% |
BASM16 | 497679 | 7917 | 0.6 | 76.3% |
Lymph nodes | Reads | Distinct CDR3s | D50 | Frequency top 100 CDR3s |
iBA LN6 | 443254 | 36954 | 23.0 | 5.7% |
iBA LN7 | 369392 | 32088 | 20.2 | 6.8% |
iBA LN9 | 339861 | 13263 | 1.8 | 37.0% |
iBA LN10 | 343714 | 25247 | 12.2 | 17.7% |
iBA LN11 | 856998 | 77852 | 16.3 | 9.1% |
BASM LN12 | 422420 | 18560 | 4.0 | 22.8% |
BASM LN13 | 423820 | 30205 | 11.9 | 15.3% |
BASM LN14 | 366526 | 32962 | 15.0 | 10.5% |
BASM LN15 | 378908 | 92206 | 8.0 | 15.0% |
BASM LN16 | 458374 | 26120 | 8.4 | 16.4% |
