Table 1 List of SNP markers used for distinguishing 368 wheat genotypes along with minor allele frequencies (MAF), PIC and genetic diversity

From: Development of model web-server for crop variety identification using throughput SNP genotyping data

Marker	Assigned code	Chromosome*	Consensus position (cM)*	MAF	Gene Diversity	PIC	Allele
AX-94614591	BW01–1A	1A	54.04	0.4743	0.4987	0.3743	T/G
AX-94548062	BW02–1A	1A	75.74	0.4058	0.4823	0.3660	T/C
AX-94491525	BW03–1A	1A	88.71	0.3983	0.4793	0.3644	A/G
AX-94888336	BW04–1B	1B	24.22	0.4738	0.4986	0.3743	A/G
AX-94755340	BW05–1B	1B	38.86	0.4753	0.4988	0.3744	A/G
AX-94986554	BW06-1B	1B	92.32	0.4932	0.4999	0.3750	A/C
AX-94803245	BW07-1D	1D	50.88	0.3856	0.4738	0.3616	T/C
AX-95070278	BW08-1D	1D	140.84	0.4082	0.4832	0.3664	A/G
AX-94476558	BW09-2A	2A	83.23	0.3945	0.4777	0.3636	A/G
AX-94496990	BW10-2A	2A	124.18	0.3631	0.4625	0.3556	T/C
AX-95217784	BW11-2A	2A	179.61	0.4835	0.4995	0.3747	A/G
AX-94694991	BW12-2A	2A	179.61	0.4033	0.4813	0.3655	T/C
AX-94441179	BW13-2B	2B	76.24	0.4632	0.4973	0.3736	T/C
AX-95628947	BW14-2B	2B	104.59	0.3721	0.4673	0.3581	A/G
AX-94589168	BW15-2D	2D	295.13	0.3179	0.4337	0.3397	T/C
AX-95023272	BW16-3A	3A	3.45	0.4959	0.5000	0.3750	A/G
AX-94664169	BW17-3A	3A	84.43	0.4973	0.5000	0.3750	A/G
AX-94693058	BW18-3B	3B	83.69	0.3817	0.4720	0.3606	A/C
AX-94975644	BW19-3B	3B	86.82	0.4109	0.4841	0.3669	A/G
AX-94704465	BW20-3B	3B	202.68	0.4675	0.4979	0.3739	T/C
AX-94609368	BW21-3D	3D	1.69	0.4914	0.4999	0.3749	A/G
AX-94681475	BW22-3D	3D	176.91	0.3736	0.4681	0.3585	A/C
AX-94795024	BW23-4A	4A	45.84	0.4563	0.4962	0.3731	C/G
AX-95020717	BW24-4A	4A	188.85	0.4538	0.4957	0.3729	T/G
AX-94575968	BW25-4B	4B	9.19	0.4659	0.4977	0.3738	T/C
AX-94522843	BW26-4B	4B	118.61	0.4000	0.4800	0.3648	T/C
AX-94971372	BW27-4D	4D	51.97	0.4823	0.4994	0.3747	T/C
AX-94728173	BW28-4D	4D	53.82	0.3424	0.4503	0.3489	T/G
AX-94438106	BW29-5A	5A	10.64	0.4819	0.4993	0.3747	A/T
AX-94686942	BW30-5A	5A	43.27	0.3590	0.4602	0.3543	A/G
AX-95630073	BW31-5A	5A	67.62	0.4918	0.4999	0.3749	A/G
AX-94816812	BW32-5B	5B	102.31	0.2557	0.3806	0.3082	T/C
AX-94847013	BW33-5B	5B	125.63	0.4850	0.4996	0.3748	A/G
AX-95241690	BW34-5B	5B	127.3	0.4913	0.4998	0.3749	T/C
AX-94727602	BW35-5B	5B	243.74	0.5000	0.5000	0.3750	C/G
AX-94534026	BW36-5D	5D	4.8	0.1789	0.2937	0.2506	T/C
AX-95632832	BW37-5D	5D	153.73	0.0976	0.1761	0.1606	A/C
AX-94507146	BW38-6A	6A	26.51	0.4076	0.4829	0.3663	T/G
AX-95230097	BW39-6A	6A	26.51	0.4849	0.4995	0.3748	A/G
AX-95229606	BW40-6A	6A	78.85	0.4709	0.4983	0.3742	A/C
AX-94437335	BW41-6A	6A	80.46	0.4850	0.4996	0.3748	A/G
AX-94551315	BW42-6A	6A	103.98	0.4206	0.4874	0.3686	T/C
AX-94699925	BW43-6B	6B	45.96	0.3071	0.4256	0.3350	T/C
AX-94986476	BW44-6B	6B	62.83	0.4959	0.5000	0.3750	A/G
AX-95160166	BW45-6B	6B	64.51	0.4860	0.4996	0.3748	T/G
AX-95130119	BW46-6D	6D	17.65	0.4573	0.4964	0.3732	C/G
AX-94388518	BW47-6D	6D	177.76	0.4971	0.5000	0.3750	T/G
AX-94417618	BW48-7A	7A	29.9	0.4973	0.5000	0.3750	A/C
AX-95080011	BW49-7A	7A	122.12	0.4390	0.4926	0.3713	A/T
AX-94848356	BW50-7B	7B	1.72	0.4986	0.5000	0.3750	C/G
AX-95121721	BW51-7B	7B	1.72	0.4802	0.4992	0.3746	T/G
AX-95004702	BW52-7B	7B	34.33	0.4571	0.4963	0.3731	A/G
AX-94431804	BW53-7B	7B	132.83	0.4114	0.4843	0.3670	T/C
AX-94861586	BW54-7D	7D	115.25	0.3945	0.4777	0.3636	C/G
Mean				0.4271	0.4764	0.3615

^*Chromosomal position as per consensus map available on CerealsDB (http://www.cerealsdb.uk.net/cerealgenomics/CerealsDB/indexNEW.php)

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Table 1 List of SNP markers used for distinguishing 368 wheat genotypes along with minor allele frequencies (MAF), PIC and genetic diversity

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